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53-3480-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3154707 [Map]; Strand: w
      • AT3G10180.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -63; Region: promoter
      • AT3G10190.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -591; Region: promoter
    Flanking Genome Sequence: 53-3480-1 - 3-prime edge 
    CGNTNTTNTT TTAGGGTAAN CTACANNTTT GCANAGGGAG GGAAAANTAN 
    TTTCAAACAC CTGANAAANA GATATTTTAG GTCTTACTTT GTTCNCCGGA 
    NAANATTATC GGANAATGGN NAGAATCCAT GTNTCANTCA NAGCGCGACC 
    GTTTTNGTCG GAGGACGCNA ANACAAGTCC CTGGAANATC

AT3G10180.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G59540.1); Has 155291 Blast hits to 84008 proteins in 3275 species: Archae - 1854; Bacteria - 27736; Metazoa - 67441; Fungi - 13681; Plants - 10077; Viruses - 530; Other Eukaryotes - 33972 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G10190.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G41410.1); Has 18786 Blast hits to 12756 proteins in 1414 species: Archae - 1; Bacteria - 149; Metazoa - 7817; Fungi - 3299; Plants - 4581; Viruses - 0; Other Eukaryotes - 2939 (source: NCBI BLink).
Link
InterPro Scan - TAIR