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53-3480-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30339487 [Map]; Strand: w
      • AT1G80730.1 - [+] show detail - zinc-finger protein 1
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 53-3480-2 - 5-prime edge 
    CTGCCGTCAA TCATTATATC AAACAAAGAT GAGAATAAAA AAAGTTATAA 
    TGAAGACTAA AAAGAAGATG GCAGAGCTCA TAGCTTAAGA GTCAAGTCAA 
    TTTTCTTAAA CTGATTATGA TCTTCTTGGT TGCTCTTGAA ATGTCCAATT 
    CTCTCCAACT TAGCAGCAAC CATGTTACTG TTATTATTTC CGGCGACTTC 
    AAGGTGAAAT TTCTCCGGCA ACATCTTTCC TATGGTCGGT TTCTGGTGAA 
    TGCTCTGTTT AAAAACATGA CTTAAACTCG TCGTTTGTCT TCCTAAGAAG 
    CTGGGCTTAT GGATCGTTGA ATGAGCTTGA ATCCCTAACG TTGACCTGTT 
    ATTCACCGAG CCATGTAATG GTAACGATGC CATGCTTGCG AATCTGCTGA 
    CTGAACCGTG GCCAAACGCA AACGCTGAAG AAGGCAAGGA GGAGAGAGTC 
    ATCTTGTAAT ACTGTCCACG TTTGGCTAAG GTGCGCTCAC GTTTATGAGC 
    GTTTTGGTGA CCGCCTAGCG CTTGTGAACT ATAGAACTTT CTTTGACAAT 
    AATTACACG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30339371 [Map]; Strand: w
      • AT1G80730.1 - [+] show detail - zinc-finger protein 1
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 53-3480-2 - 3-prime edge 
    GACGGCAGGG TGTGTTAGAG TTTCACTAAT GATCAAGTTG TACTTTTTAT 
    ATATTTCATT GATACCTTGT TGATGTAATT CAATATTTTA GGTCTGTTTT 
    TAAGTCCATG TAGTACAATA CTAACAACTA TTAAAATGGA CTATATGGAG 
    AAAAGGTTAG GTCGTCCACG TACGGTACAT ATAGCTTTAG ACTGGTGTAG 
    TTATTATAAT TACAAATGTG GACATCACAT GTATAACTAT AACATAACAA 
    TAAGATGAAT ATCATATATT AAAGGTCAAT TGAAATTAGT TCGACGTAAT 
    AATAAGATGA AAATATCCAA AAAGATGCAA GTACAAATTA TTGTGGGATA 
    TAGTCGTTAA GAGAAGCAAA ACATGTCCTA CGTTATACGT ATTATTGCCC 
    ACTAGATTGT CACCGAATTA TTAGACGTGA GCTGACTTTA GTCAATCAAT 
    ATCAATATAT TTCTTCGGTG TAAATCAATC ATGTAGAGTT TTGTTTTTTT 
    TCTTCCTTCT TTTGACAAAA TAAAAAGTCA TTCATATATA TTCGTTTAC

AT1G80730.1

Model type
Protein coding
Short Description
zinc-finger protein 1
Curator Summary
Encodes a zinc finger protein and is expressed at high levels in the shoot apex, including the apical meristem, developing leaves and the developing vascular system. expression induced three days post germination. T-DNA insertion mutant has a dominant phenotype in leaf initiation.
Computational Description
zinc-finger protein 1 (ZFP1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: photomorphogenesis; LOCATED IN: intracellular; EXPRESSED IN: inflorescence meristem, petal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT5G10970.1); Has 1054 Blast hits to 1054 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 1051; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR