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Mutant Lines
53-3485-1

53-3485-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 24052269 [Map]; Strand: c
  - AT5G59690.1 - [+] show detail - Histone superfamily protein
    Distance: 126; Region: intergenic
  - AT5G59700.1 - [+] show detail - Protein kinase superfamily protein
    Distance: 116; Region: intergenic
Flanking Genome Sequence: 53-3485-1 - 5-prime edge
```
ACTTTGCTCA TTGTCTTCTA CGGGAACTTT CCCGGACATA GGAACCGCCC 
TTTCGTTTTC CTCATCCATC GTGAAATCAG GAAATAAATG TTCGAAGATT 
TGAGCTCAAA AGTCCAATTT CATCTACCTC GGACG
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 24052397 [Map]; Strand: c
- AT5G59700.1 - [+] show detail - Protein kinase superfamily protein
  Distance: 0; Region: exon2 (3UTR)

GAAACGAGGA CACGACGTCG CATTGGTACG GATATGAGTT AAACCGACTC 
AATTCCTTTA TTAAGACATA AACCGATTTT GGTTAAGGTG TAACAGTGAG 
CAACCGATAC AAGTTTGATT GAGCAACTTG ATGACAAACT TCAGAATTTT 
GGTTATTGAA TGAAAATCAT AGTCTAATCG TAAAAAATGT ACAGAATAAA 
AGCTAGAGCA GAACAAAGAT TTCTATATTC TGGTTCCAAT TTATCATCTC 
TTTAACGTCC CTCAGATTTG ATCAGCTGCG AGAAAACTTT ACTCATGGAA 
ACACCTGAAC TATCATCAAC ACTCGATTCT TCTTCATCTC CCTTCG

AT5G59690.1

Model type: Protein coding
Short Description: Histone superfamily protein
Computational Description: Histone superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: nucleosome assembly; LOCATED IN: thylakoid; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Histone H4, conserved site (InterPro:IPR019809), Histone-fold (InterPro:IPR009072), Histone core (InterPro:IPR007125), Histone H4 (InterPro:IPR001951); BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G59970.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G59700.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR