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53-3515-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16750751 [Map]; Strand: w
      • AT4G35200.1 - [+] show detail - Arabidopsis protein of unknown function (DUF241)
        Distance: -848; Region: promoter
      • AT4G35210.1 - [+] show detail - Arabidopsis protein of unknown function (DUF241)
        Distance: -473; Region: promoter
    Flanking Genome Sequence: 53-3515-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAT GCATATATAC AATCAAAACT GGAAGACCTC 
    ATGAAATTTT TTCTTATTAA TGACTATTAG CGATGTTTAT GAATTTCCCC 
    CCTCCATAAA CATATGATGT GATTCACATT CAAAAACAAA ATGCAAAATA 
    CNGATTTGAA TATAAAACAA GAAATGAATG TGCACGACGG ATTCTGCACC 
    TTATTGGCAT AGTTTAAGGC AAATCCAGAA AGGCTTGTCT CCTTGGAGTT 
    GATGGTAACA ACACCATGAT ATTAGTATAT TACAGTTCAT GACACAACTA 
    CAAGAGCCTC ATAACAAATC AAATTTTGCA GTGTAGGAGG CAGACAATAT 
    CTAATACATT GATGTATCCA CGAGTGGTAC TAATATCATA TTCTTTATGG 
    AGACAAGCCT TGCTGGTAGC ATGTTACTAC ACCAATAAGA TGCAGAATCG 
    TAGATAATCC ATGTGATCAT ATATATTGCT TTTGTACGTT GGATGATGCG 
    TTATGGTGAG TAGTTGGAGG GAGACATTGC ACAAACATCG GTTTCTATTA 
    TTCAGATTTG AACAACCATA AGATTCCTTC CTTAAACGAT GTATATATGT 
    CTAGACCGGA GAGCCATTGA AGACAGAACA AACATCTAAG CATTTTCTTC 
    ATCTCAAAAA CAGAGAAAGA AAGCTCAAAC CAAAAAATGG CAGTCTCCTT 
    CATGTTCGAT CTAACAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16750705 [Map]; Strand: w
      • AT4G35200.1 - [+] show detail - Arabidopsis protein of unknown function (DUF241)
        Distance: -802; Region: promoter
      • AT4G35210.1 - [+] show detail - Arabidopsis protein of unknown function (DUF241)
        Distance: -519; Region: promoter
    Flanking Genome Sequence: 53-3515-1 - 3-prime edge 
    ATATATGAAT GGACTGCAAA AGCGATGAAT GCAGAAGAAG TAGTTGTCTT 
    TTCTTGTAAT GGCCTTTTCT TGTATTCAAG AGACAAAGGC TTCTATATAT 
    ATAAAAAAAT CCAAAAAGTA ATCAAGTCGT TTAAGGTTTT CTAGAATAAA 
    GAGAACATGG ATGATGAATC ACTTGGTTGT GTAATTACAG AGAAGCAGAA 
    GCACTTGCAA TTGCTCTGTT TTCTTCTCTG TTCAAAAGCT TTCNTTCTGN 
    NNCCATGACC TCTCGGGANC NCTNTNNNAA CTACCNT

AT4G35200.1

Model type
Protein coding
Short Description
Arabidopsis protein of unknown function (DUF241)
Computational Description
Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35210.1); Has 517 Blast hits to 501 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 509; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G35210.1

Model type
Protein coding
Short Description
Arabidopsis protein of unknown function (DUF241)
Computational Description
Arabidopsis protein of unknown function (DUF241); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF241, plant (InterPro:IPR004320); BEST Arabidopsis thaliana protein match is: Arabidopsis protein of unknown function (DUF241) (TAIR:AT4G35200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR