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53-3524-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17820631 [Map]; Strand: c
      • AT4G37895.1 - [+] show detail - other RNA
        Distance: 5453; Region: intergenic
      • AT4G37900.1 - [+] show detail - Protein of unknown function (duplicated DUF1399)
        Distance: 1106; Region: intergenic
    Flanking Genome Sequence: 53-3524-1 - 5-prime edge 
    TGTAACAACA AAAATGGAGA CGACACAACT TGGAAGAGAA ATCAACTCGA 
    AATAGCCAAG AGAATGTTCG AAAACCCCCT CAAATCCGAT GCTTCCTTTG 
    ATTCCAACCT CCAAAAGCCC ATCTGCTCAA ATCTTCATTT CGAGGACGAG 
    GACTCGAGGA GTATTACAAG GTACCTCTAT AGAATCAATG GCTTCCATGG 
    ATTTTGAAAC TCTTTACTTC TAATAAACAC CATTGTAATG TCTTGTTGTG 
    AAATTGTGTA AGGAACAAAG GATAGTGAAA GCTGAAGAGT GGGCAGAGTT 
    TATGGAGTTT CAGAGTTTTT TTTACTAAGT GGCCTCTGTT TTTGATTCTT 
    CAGTGGTCAA TTTTGTGATG GGATTTGATT GAAATTGGAG AATGGTTTCA 
    TGAAATCTCC TCTTCGGGCT GAGGTTGATT CATGACTCTT TCATTTTTCT 
    AGTGTCTCAT TGATGATAGA CATAAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17706468 [Map]; Strand: w
      • AT4G37685.1 - [+] show detail - unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BL...
        Distance: 379; Region: intergenic
      • AT4G37690.1 - [+] show detail - Galactosyl transferase GMA12/MNN10 family protein
        Distance: -1426; Region: intergenic
    Flanking Genome Sequence: 53-3524-1 - 3-prime edge 
    ACTGGCCGAG CTTTTTGTTT TCACAGCGAT GGGTTTACAT TGGTTTTGAA 
    ATTCAAATTG ATCTCGGTTC GGTTTAATTT GGTTTAGAGA AGAAAACCAA 
    AAAAAATACG ACACCGCCGA TGGGTTTTTG AGAATGAGGT GCCGTGGATC 
    CAAAAATGCA TGATTTTTGT GGATTAACCC CTTTAGAAAT CGTAGACACG 
    CGCTCAACGC GACATGAGTG AGAGTGGCTG TGAAATAGCA CGATTGGTAA 
    AAGTGGGGTA TGAAGTGGAG CTCTCTCATT GGCTAAAAAT ATAAAAATAG 
    TAGGGGAGCT CCTCCTCTCA TATATTGAAA ACAATAACAA ACAGTGTATT 
    TTAACCACTA CTAGTTATCT TTAACTCTAT CTCATATCAA CAAACCGTTG 
    TGATATCCTT GAGACACGTC CTAACAACAA CTTACACATC AACCATTGAA 
    CCCAGATGCA CTTCCTGCTG TAACCTCAGT CTGCAATGCT TTGTCTTACA 
    TGCAAACTCC ACCAN

AT4G37685.1

Model type
Protein coding
Computational Description
unknown protein; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37690.1

Model type
Protein coding
Short Description
Galactosyl transferase GMA12/MNN10 family protein
Computational Description
Galactosyl transferase GMA12/MNN10 family protein; CONTAINS InterPro DOMAIN/s: Galactosyl transferase (InterPro:IPR008630); BEST Arabidopsis thaliana protein match is: Galactosyl transferase GMA12/MNN10 family protein (TAIR:AT2G22900.1); Has 507 Blast hits to 506 proteins in 109 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 185; Plants - 285; Viruses - 4; Other Eukaryotes - 29 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G37895.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT4G37890
Link
InterPro Scan - TAIR

AT4G37900.1

Model type
Protein coding
Short Description
Protein of unknown function (duplicated DUF1399)
Computational Description
Protein of unknown function (duplicated DUF1399); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1399 (InterPro:IPR009836); BEST Arabidopsis thaliana protein match is: Protein of unknown function (duplicated DUF1399) (TAIR:AT2G22660.2); Has 24258 Blast hits to 6156 proteins in 640 species: Archae - 4; Bacteria - 13513; Metazoa - 5207; Fungi - 694; Plants - 2964; Viruses - 274; Other Eukaryotes - 1602 (source: NCBI BLink).
Link
InterPro Scan - TAIR