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53-3540-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3498111 [Map]; Strand: c
      • AT3G11160.1 - [+] show detail - unknown protein; Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bac...
        Distance: -948; Region: promoter
      • AT3G11165.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: 53-3540-1 - 5-prime edge 
    GAAGTACAGC AGGATCCGTT TAGTTGGCTC GTCCTTTTAT TGACTCCACG 
    AGAAAAGAAA GCAGACAATT AGTTTTTTTT TTTTGGGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3498235 [Map]; Strand: c
      • AT3G11165.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 53-3540-1 - 3-prime edge 
    TAGAAAGAGT GAAAACACTT TAGTTTTTAA GAAACAAACA AAAACTCATA 
    AAATCTCCCA AATGTTTATA GAAATCCATA CCACTTCGGG AAAACGTTCT 
    CTCAGATCTC TCTCCATCGT TCGAAGATAT TCGAATACCT GGATTGTTTC 
    TGGTGGAAAC AAAAAAAAAA NANNAGGG

AT3G11160.1

Model type
Protein coding
Computational Description
unknown protein; Has 6 Blast hits to 6 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11165.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR