Home
Mutant Lines
53-3541-1

53-3541-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 30053350 [Map]; Strand: w
- AT1G79900.1 - [+] show detail - Mitochondrial substrate carrier family protein
  Distance: 0; Region: intron1 (CDS)

CTGAGATGTG ATCAAAAAGT AGGGGAATCT TTTTATATAT TCCTGCGACG 
TGATCAAAAG TAAGGTGAAT CTTTGAAAAA GAACCTGAAA AGTGACGGAG 
GCCAAAGGCG CAGCCATGCC TCTGTAGAGA GAGGTGGGAC CCTCAACGGC 
GAGCATCCGC CGGAGAATGG AGAAGGCAGA TCCAGATTTC GAGCTCTGTT 
GCTGGCGAAT TCTGAGGGTG TCCAAGGGGT AGCCGGAGAT GATGCCGGCG 
ACGCCACCGA AACCACCGGC GACGAACTCT CTTCCCCAGC TGGTCGCCAT 
AAACTCCGGC CAGAAATCCA TACCAAGGAT GGGATTGTAC GAACGTTGTC 
CCTCTTTTTT

3 prime edge [+] show sequence
1. Chromosome: 1; Position: 30053234 [Map]; Strand: w
  - AT1G79900.1 - [+] show detail - Mitochondrial substrate carrier family protein
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 53-3541-1 - 3-prime edge
```
CATCTCAGGA TATTATTCCA TAAAGCAAAC GAAAAGATGC TTTCTTGATT 
CACCTCTTTT GTGTAAGATC ATTCATTTCA TTACTCTCAT ACAGTATTAT 
CTACCCAG
```

AT1G79900.1

Model type: Protein coding
Short Description: Mitochondrial substrate carrier family protein
Curator Summary: encodes a mitochondrial ornithine transporter that exports ornithine from the mitochondria to the cytosol
Computational Description: BAC2; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G46800.1); Has 25782 Blast hits to 14100 proteins in 457 species: Archae - 0; Bacteria - 6; Metazoa - 10775; Fungi - 7497; Plants - 4679; Viruses - 6; Other Eukaryotes - 2819 (source: NCBI BLink).
Link: InterPro Scan - TAIR