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53-3545-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1554376 [Map]; Strand: c
      • AT4G03500.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-3545-1 - 5-prime edge
    GATCCAAGTG CACATCCGGC CTTCCCATTG AAAATCCCAC TCCTGAAAAT 
    ATTCCTAGCT AGCTGTTTAT GAAAAATAAA ACAGTTTTGT TGCTTTCCAC
    TGAATTTGCT TAGCACGTAG ATTAAAAGAT ATGAAATAAT AATTCTTATA
    AGCTCAGGTT CAGGAATGTC TACACGTCCC TTTCTGTTTT CGTCAATATG
    AAAAGAAAAT TATGGCCAGT TTAATTTTAA TCGATAGAGC CATTATTGAA
    TCTCTCCACG CACCTTTTGT TGTATACGAA AGGCTACTTG GAAATTGAGT
    GATTTCTAAT TACATTATTC CAACTAGCTA AAATTTTTTT AAAATACAAC
    TTGAAAATTT GATAAAGCAT GCAATGGCTT ACTGAAATAA TTAGTCTCAC
    AATAAAAAAT TTCACACAAA GACAACACGA AACGACGAAG TATGTTGCAG
    ACGACATCAC ATCGTATTGT TGCAAAGCGT GAGCGATTTT TAACAGGGAT
    TTGCTGCATA GAACAACAAA ACGATTAATT GACTAAACGG AGTTAGCCTT
    GTACGATAAC GTACTAGTGG AAAACTAACT GGGCTTTATA AATGATTGGG
    TCCTAAAAGC CCACTACTAG CAAACCCCCA NTAACTCCAC AGTCTGAAGC
    CTGAACCGAT CACCTNCGCC CTTTATATTC TTTCCGATGT ATCTNGTTGG
    AAAGTTGCNC ACNTAGCTT
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1554492 [Map]; Strand: c
      • AT4G03500.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3545-1 - 3-prime edge
    CTTGGATCGA CGAGTAGCAT GAAAAACGTC AGGCAATACC AAGAAACAAT 
    GTCAGATCCA CACCATCTCT CGATTTGTCC ACTCTCTTCG ACGAAACCAG
    TGAAACTAAG CCGATGGATC CAAAGACGAT GGCTGCAGTA AGAGCAGGTA
    AGGAAAATTA CCTGAGAAGT AATAACAGTT ACATTAGTGT TGCTCCAACC
    TTAGTGAACG ACCGTGGAAA TACAATACTT CATCTTGCTG CTTCATCTCA
    CTCGA

AT4G03500.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT4G03460.1); Has 38634 Blast hits to 17459 proteins in 653 species: Archae - 49; Bacteria - 2374; Metazoa - 20314; Fungi - 3164; Plants - 3215; Viruses - 213; Other Eukaryotes - 9305 (source: NCBI BLink).
Link
InterPro Scan - TAIR