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53-3546-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24037803 [Map]; Strand: c
      • AT5G59660.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon10 (CDS)
    Flanking Genome Sequence: 53-3546-1 - 5-prime edge 
    ATACAGGAAG TTTCTTACAG TAGCTGGAGT CCACCTTTCC TTTGTAGGGA 
    TTGAGGAATT GTACCGTTAA GATCGTTCCC GCTTAAGTTT CTGCATTAAA 
    AGAGCAATGA ATCTTGTTTC CAGAAAAAAA AACAGAGCAA TGAACCTGAG 
    GTAGAATTGG AAAAGCATTA NAAAATATGC TTGANAGACA CTTACATGAA 
    CAACAATGAT TTTATGTTGC CTANAAACTC CGGCACCTCT CCGGTCAAGT 
    TGTTATTCGA CAAGTCCCTA ATGTTAGCAA AGAGAGAATT ATCTATGCTA 
    TTATTACATC TGATTTCTTC GCATATATAN AACAATTTCT TGCTTACAAC 
    TAACAATGGA CATACTTACA GTTTTTCTAG TTGCGTAAGG TTTTGAATGG 
    CAGCTGCTAT GTTTCCAGTT AAACCACTCG AANACAAGTT TCTGGNGACA 
    TTTTCAAAAC CACATTCAAA GTTGTTAATG ATCATGATTA CCAACGGATT 
    TGAANAGTGA CTGTGCGTGC ATGTGTACTA GTGAACTCAT GACTTACA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24049133 [Map]; Strand: c
      • AT5G59680.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron7 (CDS)
    Flanking Genome Sequence: 53-3546-1 - 3-prime edge 
    CCCACATATG TGCGCAACTT TTCTCTGTTA TCATCCACAA CCCTTTTGTG 
    CCTCTGTCTT GAAACAACAC TTGTCTTCTT ATAGCCGTCA AGGAAACTCA 
    AGGCTTTTTC CCTCTGAATC ACCCACAAAA CCAACTAGCA AGAGCTTTCC 
    AGTTGTAATT GTTGCATCAG TTGGTTCTGC GGCCATCCTC CTCATTGTTG 
    TGGTGGTTCT CATTCTTTTT CTCCGAAAGA AAAAGCCAAC TAATGAAGGT 
    AATATGCATC TGCATCGAAT AAGAAAACCG ATAGAACTCA TGATTATGAT 
    TTTTACTAAC CCCTAGATGC TGATCTAACA GTTTTTCTCC CGCGTCCAAG 
    TAGGCCAACG ATGAATGTTC CTTATGTTAA CTCACCTGAG CCGTCAATCG 
    AGATGAAAAA GAGAAAGTTT ACTTATTTAG AGGTTACGAA AATGACTAAT 
    AATTTCGGAA GAGTTGTAGG GGAAGGAGGA TTTGGCGTTG TCTGCCATGG 
    TACNGTAAAT GGTTCTGAAC AGGTGGCTGT TAAACTACTG TCTCAATCAT 
    CAACTCAAGG TTATAAAGAG TTCAAGGCAG AGGTATTTCC AATACAATCT 
    TTCCAACTAG TATCTGTTTT CAACAGCAGA AACCTAATTT TTTTGTTTTC 
    CTTTGCATGA GTGCATTANG TTGATCTTCT TCTGAGAGTT CACCATACGA 
    ATTTGGTAAG

AT5G59660.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59680.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59650.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR