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Mutant Lines
53-3559-1

53-3559-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 18162215 [Map]; Strand: c
  - AT5G44980.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
    Distance: 0; Region: exon4 (3UTR)
  - AT5G44990.3 - [+] show detail - Glutathione S-transferase family protein
    Distance: -917; Region: promoter
  - AT5G44990.1 - [+] show detail - Glutathione S-transferase family protein
    Distance: -943; Region: promoter
Flanking Genome Sequence: 53-3559-1 - 5-prime edge
```
CTTTTAATAG CAAATAAATT ATGAATCCAA AACCCAATTA GAATTTTATA 
CAACCAGAGA AAAGCAATTA TTAATTAAAA TGTATATAAA CTACAATTAT 
TATGTTGAAA TTAAAATATT AATTTAAAAC AAAAAGAGAA AAATATAATT 
ATGCTGTAAC TCTGTCCTGA AATTGAAATC AAAGCAACAA AAAGCCAAAC 
TACAGGAATA AGGTCACTTG AAACAATGTT CAACAACCAA AGATAACTTG 
ACATGTGGGA GAAAGCTTTG TTGATGTAAG AAGCTTCTTG TAGCTCTTTA 
GGTAGATAGA AGAAGAATAT GAGAAACGTA GAGTAAGTTT CTTGAGGACT 
GCTGAATTCT CAAGAAA
```
3 prime edge [+] show sequence
1. Chromosome: 5; Position: 18162331 [Map]; Strand: c
  - AT5G44990.3 - [+] show detail - Glutathione S-transferase family protein
    Distance: -801; Region: promoter
  - AT5G44990.1 - [+] show detail - Glutathione S-transferase family protein
    Distance: -827; Region: promoter
  - AT5G44990.2 - [+] show detail - Glutathione S-transferase family protein
    Distance: -904; Region: promoter
Flanking Genome Sequence: 53-3559-1 - 3-prime edge
```
CTNNANAGCT TACGTGACTG CANGTNANNT GAGNTCNNNA NANNCCTGCC 
TTGATCGGTG GNTGANTGTG AAATNGTTGG AGANATCTCT GAAAAGCATT 
TCCTTACTAT TCNNTTGGTG AGTTCTACAG ATATGCTATT AAGAACTTCA 
CCTGAAAGAT TTCTTGAGTT TAACAGTTCA AGATGAAGAA TAATCTACCC 
ACG
```

AT5G44980.1

Model type: Protein coding
Short Description: F-box/RNI-like/FBD-like domains-containing protein
Computational Description: F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G44960.1); Has 1984 Blast hits to 1940 proteins in 26 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 1982; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G44990.1

Model type: Protein coding
Short Description: Glutathione S-transferase family protein
Computational Description: Glutathione S-transferase family protein; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT4G19880.1); Has 2474 Blast hits to 2474 proteins in 819 species: Archae - 30; Bacteria - 1545; Metazoa - 25; Fungi - 237; Plants - 128; Viruses - 0; Other Eukaryotes - 509 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G44990.2

Model type: Protein coding
Short Description: Glutathione S-transferase family protein
Computational Description: Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT4G19880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G44990.3

Model type: Protein coding
Short Description: Glutathione S-transferase family protein
Computational Description: Glutathione S-transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem; CONTAINS InterPro DOMAIN/s: Glutathione S-transferase, predicted (InterPro:IPR016639), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT4G19880.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR