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53-3583-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30151356 [Map]; Strand: w
      • AT1G80160.1 - [+] show detail - Lactoylglutathione lyase / glyoxalase I family protein
        Distance: 0; Region: intron1 (CDS)
      • AT1G80160.2 - [+] show detail - Lactoylglutathione lyase / glyoxalase I family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3583-1 - 5-prime edge
    GATATTATAT ATATATTTCT CTTTAAGAAT TGTTAAATTT CGTAATTATA 
    TACTTATTTT GTGTGATTAT AGGTTGTTTG GACATGGAAT TGGGATTCAT
    CTTCTTCAAT CTCCTGAACC TGAGAAATTA CTCAAGAAAA CAGAGATTAA
    TCCCAAGGAT AATCACATTT CTTTCCAGGT ACCCTTTTTT TTTTACCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30151241 [Map]; Strand: w
      • AT1G80160.1 - [+] show detail - Lactoylglutathione lyase / glyoxalase I family protein
        Distance: 0; Region: exon1 (CDS)
      • AT1G80160.2 - [+] show detail - Lactoylglutathione lyase / glyoxalase I family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3583-1 - 3-prime edge
    GATAATATCT CCATGTAGGT AAGTATGTAT ATATGTACCA CGCGCCATCG 
    AAATCAAAAG AGTCAGGTCT GCGAATAGGG AGGAACCCTA AAACGTTTTG
    GTAAAAGCTA ATGGATTCCT CGACGGATCG ACAGAGAAGA GAGATGTGAT
    TCAAAGACTT GATATGCAGA GGGTTTCCCG TTTCGTCCTT CATTTTTTCT
    TTCTTACCCA GAGAGACGTA CAGAAACAGA ACGCTGGCTC GATCGTAGCA
    ACAAAACTTA GAATTCCGAA ATATACGCCT ATATAATGAA TGAGAATTCA
    GGAGGAAGGT GGTCATTTTG ATAAGAATGG CTTATATGTA CACGTGTATA
    TGTGTGTGTG TCGTGATCCA GTAAACTACG GAACTGATCT GAGGATGGAT
    GGCGATGATG TCTATGTTTC TTTATATGCA TCCCTTCATC TCACTTCGAC

AT1G80160.1

Model type
Protein coding
Short Description
Lactoylglutathione lyase / glyoxalase I family protein
Computational Description
Lactoylglutathione lyase / glyoxalase I family protein; CONTAINS InterPro DOMAIN/s: Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80160.2

Model type
Protein coding
Short Description
Lactoylglutathione lyase / glyoxalase I family protein
Computational Description
Lactoylglutathione lyase / glyoxalase I family protein; FUNCTIONS IN: lactoylglutathione lyase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Lactoylglutathione lyase / glyoxalase I family protein (TAIR:AT1G15380.2); Has 148 Blast hits to 148 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR