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53-3603-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24132981 [Map]; Strand: c
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 2093; Region: intergenic
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -1545; Region: intergenic
    Flanking Genome Sequence: 53-3603-1 - 5-prime edge
    CTCCCAGGGA ACAAGGACAC GTTGTGATTA AACAAATCTT GCTAATTAAC 
    CAGATCCTAT CCATAATGTG AAATGTTGAC GGTGAAACCT AGACTCGTAC
    AAAATACATT GCTGATGTAG AAGGAAAATG CCTAGAAGAC CAAATGGCAA
    ATAGGTAAAA TTGAATCCTT ATCTACTAAC GAATAGCGTG GACGAAGCCA
    TTTTAAGGGT ATGAATCTTA AATGGGCTTA TAAACCGTTC ACTAAATGAT
    TATGCTCCTA AGCCCATCTA AACTATGGAT CCATATTTAC TAGTTAGAGA
    AATTGAATGT TGTGAATCTC AAGCCTGAAA AGTTTAGCGC AGGTTATGTG
    TTAATAATGA AAAAACATTG CTCACAGGTC ACAGCTATAT ATTGGATCCG
    AAAAGACATG AAGAACACAT GCTTCAGATC GTTTACTTTC GTCCTTCTTG
    AGCTTTAGTA TGTTTTTTAT GGCTGGAATT TCTTTATCAA GTAATCACCA
    AGCCACCAAC TTGAACAGAG CAATA
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24133097 [Map]; Strand: c
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 2209; Region: intergenic
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -1429; Region: intergenic
    Flanking Genome Sequence: 53-3603-1 - 3-prime edge
    CCTGGGAGCT ACAAGAGTTG GGGGCATGAT GAGAATTTTT TCATGTGGGC 
    ACGAAAATTC AGGCCGTCAG CACAGCTGGC CGCACTTATT AATTCGAGAA
    TCGTGATTAA CATCAGATTA ATAGGAAATC CACTTGGTTT ATTAAACAAA
    ACAGCATTAA GTAATCGCAT CAATTAGAAG ATGATTGAAG ACTAATCTCT
    TAGCTGTTCG CTAGTTTGAC CTTTCATTTA ATTTTCAGTG ACAAAGAACG
    ATTCAAATTC TGGACGATAT GACGACTTCT ATATTCAAGA AAAATAAATT
    AATTAAGACT TAATTAGTGG AACAATTATT TAAAGTTCAA CTGCCTTTGA
    GAAATTAAAA AAAGGACTAT ACACATGGCC GGTCCTATTA TGACGTGGCC
    AAAACGTTTT AAAAATAAAT TGGCTCTAAC TGTTGTTTAG ATAAATTCAT
    TTTTGACTTC TAGGATGTTA TAGGATTTTT TATATGTTTT ATTTAATTAG
    ATGTTTTGTT ATTTTCTATG TAAAATTTAA GTGCATTTAG TAGTCATTTC
    TATTTTTTGT CAAACAATAG TCATTTCTGT TATGTACCGA TTTTTATGAT
    TGGTTGAAAT TTTATAAATT TATATATGGG TATTAATAAT AAATATTTTT
    TATTTAAAAC AAAATTAAGA TGGATTATTA TTTTAGTAGA ATCTACTAGT
    TATTGGACAT TTTAN

AT5G59920.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Curator Summary
Isolated in a screen for UV-B insensitive mutants using a hypocotyl growth inhibition assay. Mutants are defective in a number of UV-B responses.
Computational Description
UV-B LIGHT INSENSITIVE 3 (ULI3); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type (InterPro:IPR001965), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59930.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR