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Mutant Lines
53-3612-1

53-3612-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 30248863 [Map]; Strand: c
  - AT1G80460.2 - [+] show detail - Actin-like ATPase superfamily protein
    Distance: 0; Region: intron1 (CDS)
  - AT1G80460.1 - [+] show detail - Actin-like ATPase superfamily protein
    Distance: 0; Region: intron1 (CDS)
Flanking Genome Sequence: 53-3612-1 - 5-prime edge
```
ATCCCGAAGC TGGGTAAAAC TAATCACCTT TTATTGTTTA AATTCATGTA 
TTCATTGGTT ATGACTAGTA AAGTGAGACT TTTTATAGTG GATGATCCCG 
ATCTTGTCTG ATTGGACACT ATTTCCGTAT CTTTGAAGCT CCATCGGACC 
AAAGTTTTGT TTTTTGTTTT TCTGTCTGTG TCTAAGCGAT CTGTTCGTTT 
TTCCGTTGGG TCTTGTCTTC CTATTTGATT TCGAATCTGT GTTCATTCCT 
TC
```

3 prime edge [+] show sequence

Chromosome: 1; Position: 30248987 [Map]; Strand: c
- AT1G80460.2 - [+] show detail - Actin-like ATPase superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT1G80460.1 - [+] show detail - Actin-like ATPase superfamily protein
  Distance: 0; Region: exon1 (CDS)

AGAACTGAGT GAACTCGACT TGATGAGAAG CAACAGGACG AGCATCGTGG 
TCGTAAATGA TGAATCTGGT GCTGGTGGTT CCTTGATCGA TTGATCCTAT 
AAATCCATTT TCTTTTGCCA TTTTTCTTTT TTATCTTTTT GGTAAAGGTG 
AAGAACGATG CTTTGTTGTT ATCTCAAGGA ATATAACGAA GAAGATGGTT 
GTTGAGGATA AAACTAAACT ACAAAATGAG ATAATGGTAA CGATTGAATA 
TAGAAAGCTG AATCAGAGTC AGAGATTTTG TTGGAAACTT CACCGTTTTT 
CTATCCATCT ACGCATTTAC TCCACCGGAT TGGATGATGA TGTATTAATT 
AAGCTTTTTA TTGGTGGATG GTCAAGATTA TGAGATC

AT1G80460.1

Model type: Protein coding
Short Description: Actin-like ATPase superfamily protein
Curator Summary: Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.
Computational Description: nonhost resistance to P. s. phaseolicola 1 (NHO1); CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY, conserved site (InterPro:IPR018483), Glycerol kinase (InterPro:IPR005999), Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 17039 Blast hits to 17024 proteins in 2439 species: Archae - 160; Bacteria - 12245; Metazoa - 663; Fungi - 209; Plants - 115; Viruses - 0; Other Eukaryotes - 3647 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G80460.2

Model type: Protein coding
Short Description: Actin-like ATPase superfamily protein
Curator Summary: Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.
Computational Description: nonhost resistance to P. s. phaseolicola 1 (NHO1); CONTAINS InterPro DOMAIN/s: Carbohydrate kinase, FGGY, conserved site (InterPro:IPR018483), Glycerol kinase (InterPro:IPR005999), Carbohydrate kinase, FGGY (InterPro:IPR000577), Carbohydrate kinase, FGGY, N-terminal (InterPro:IPR018484), Carbohydrate kinase, FGGY, C-terminal (InterPro:IPR018485); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR