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53-3616-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24623331 [Map]; Strand: c
      • AT5G61210.1 - [+] show detail - soluble N-ethylmaleimide-sensitive factor adaptor protein 33
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3616-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAAC AAGGAGGTCT TTGGGTATGT GTTGACGAAA 
    ATTTATCAAG GAGATTAAAA AAAAACCAAT TGGTNAAAGG GACCNGGGGT 
    NNATTNATNA ANNAAACCNA ATNCTTTNAT TNNAANNTNA AACNGGCNTN 
    TNANTCNTTT TTTTTTAAAA NNAACCTTTN AAAAGGGNAA AAAAAANNNN 
    CNCCTTTTTN NCCAAAANNN NNCNATTTAA ANNTTTTTAA NTGGTTTTNG 
    GNCCNAATTG GGGGNTTNAN AAACCNNNNN GGNTTTTTTT TTNCNAAAAA 
    AAANNCNTTT TNTTNNNTTT TTNNAANTTC NGNCTNTTTT TTTGGNCCGG 
    GGGGTTAANN GNAAAANTGG TTGNNCCCCA AAAAAANGGG GAANNNGGCA 
    ATTTTNNCNN CCNAAAAAAA NGGGCNTTNN NGAANTTNNC AAAAAAAANN 
    NTTTTTNCCC CNAAACCCAA AACCNCNTNN AAANNAAAAA NTGNTNGNNN 
    ANTTNNTTGG GNTTNAACNT GCCCAANTTA NCCCNNTAAN TTTTNTTTGG 
    NACCGGNTCC CTTGGTNACC NCCNCCNNAA AATNNTGGTG NCCNTNNAAA 
    NACCAATTTT CAANANTTNN TTTTGGGGAA AAACAAGGTG GAAATTGTTT 
    TTGCTTTAAG NCCAATTGGN NTTNGGTTAA CAACCAATTT TCCANGGGTT 
    TGGTTTACAA ANAANACAAC ANGGTNNTT

AT5G61210.1

Model type
Protein coding
Short Description
soluble N-ethylmaleimide-sensitive factor adaptor protein 33
Curator Summary
membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation
Computational Description
soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (SNAP33); FUNCTIONS IN: protein binding, SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, response to other organism, cellular membrane fusion, response to mechanical stimulus, cytokinesis by cell plate formation; LOCATED IN: integral to membrane of membrane fraction, plasma membrane, chloroplast, cell plate; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNAP-25 (InterPro:IPR000928), Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (TAIR:AT1G13890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR