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53-3616-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24623384 [Map]; Strand: c
      • AT5G61210.1 - [+] show detail - soluble N-ethylmaleimide-sensitive factor adaptor protein 33
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3616-2 - 3-prime edge 
    TGTTGTACTC TCAAATTCTT GNGTCGTTCT GAGTCGTCTC CGCGTTAAAT 
    CTTTTCCCTT TTTGATCCTT TCTTCCTTTC TTCTTCTTCT TCTTCGCATT 
    GATTTGGTCC TCCTTCCTCT TCTATTCTAT TCATTAAGAA CCTAATCTTC 
    ATCTT

AT5G61210.1

Model type
Protein coding
Short Description
soluble N-ethylmaleimide-sensitive factor adaptor protein 33
Curator Summary
membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation
Computational Description
soluble N-ethylmaleimide-sensitive factor adaptor protein 33 (SNAP33); FUNCTIONS IN: protein binding, SNAP receptor activity; INVOLVED IN: vesicle-mediated transport, response to other organism, cellular membrane fusion, response to mechanical stimulus, cytokinesis by cell plate formation; LOCATED IN: integral to membrane of membrane fraction, plasma membrane, chloroplast, cell plate; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNAP-25 (InterPro:IPR000928), Target SNARE coiled-coil domain (InterPro:IPR000727); BEST Arabidopsis thaliana protein match is: soluble N-ethylmaleimide-sensitive factor adaptor protein 30 (TAIR:AT1G13890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR