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53-3621-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10852949 [Map]; Strand: c
      • AT2G25490.1 - [+] show detail - EIN3-binding F box protein 1
        Distance: -2417; Region: intergenic
      • AT2G25500.1 - [+] show detail - Inosine triphosphate pyrophosphatase family protein
        Distance: 1703; Region: intergenic
    Flanking Genome Sequence: 53-3621-1 - 5-prime edge
    GCTAAAACAG AACACAAGAA AGGTCTTGCT AAAGAGCCAA GTCCCAAACG 
    ACACGAATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10853065 [Map]; Strand: c
      • AT2G25490.1 - [+] show detail - EIN3-binding F box protein 1
        Distance: -2533; Region: intergenic
      • AT2G25500.1 - [+] show detail - Inosine triphosphate pyrophosphatase family protein
        Distance: 1587; Region: intergenic
    Flanking Genome Sequence: 53-3621-1 - 3-prime edge
    GTTTTAGCTA ATTGGGATGA ACTGAAGGTA TTGACTAGTA CAACGTTTTT 
    CTAGCTGATT CCTCTAGTAT ATTGACCAAT TGGGATGAAC TGATCATAAT
    CACGTGAAAA GGCATAAGAG TCTCATGTTA CGACCCAACA CATTAGCATT
    TTATGTGCGG AAATTATAAG TTTATTATTT TATTTCCTCT CTTAGTGTAA
    TTTTTTCATA AAAAATTTGT AAAAAGTTTC AGAAAGACTA GTGTTGAGAT
    TTGGTGCTCT TGATTAACTC GTGAAGACGA ATTGATTCAA TACGCATACT
    ATCTATCTCG AATATCATCA CTCTTTAAAT GAACACAAAC ATAAACAGAA
    AAGATCACAA GCCAATTAAG AGTGCAACCA CCTAACCTAA CCAGTGGCGG
    ATCCAGGAAT TCTTTTAGCA TAAGGCACAT ATTAAATATA ATAAATAACT
    AA

AT2G25490.1

Model type
Protein coding
Short Description
EIN3-binding F box protein 1
Curator Summary
Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3.
Computational Description
EIN3-binding F box protein 1 (EBF1); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: EIN3-binding F box protein 2 (TAIR:AT5G25350.1); Has 13069 Blast hits to 4728 proteins in 296 species: Archae - 0; Bacteria - 528; Metazoa - 5097; Fungi - 1628; Plants - 4199; Viruses - 9; Other Eukaryotes - 1608 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G25500.1

Model type
Protein coding
Short Description
Inosine triphosphate pyrophosphatase family protein
Computational Description
Inosine triphosphate pyrophosphatase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf-like protein (TAIR:AT5G66550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR