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Mutant Lines
53-3648-1

53-3648-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 22810379 [Map]; Strand: c
  - AT5G56320.1 - [+] show detail - expansin A14
    Distance: 142; Region: intergenic
  - AT5G56325.1 - [+] show detail - FBD-like domain family protein
    Distance: -1834; Region: intergenic
Flanking Genome Sequence: 53-3648-1 - 5-prime edge
```
GTGAAAAGTT AGTATTTTTG TGGCGTCGTC ATGGATTTGG AGAGTGATTA 
AAACTAAGGG TTTGTCTTCG AATGGATTAA AATCGACAAA AGTATAGTGT 
TATAAAATTT TGAAAATGAA TTTTCTCAAA ATATTTATGT TGTATATTCN 
TNTCACCTCG AC
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 22752438 [Map]; Strand: c
- AT5G56210.1 - [+] show detail - WPP domain interacting protein 2
  Distance: 0; Region: exon1 (5UTR)

CTTTTCACAT GGGATCAATC TCAAGACTAA ACAACCACCA TTCCAGTAAG 
AACCAGAGGC AAATTCAATA AAACCAAAAT ACGAAAACAA AAATGAAGCA 
ATAGGGTTCT CTAAATTCAA CTCAATTCCC AGATTAATCA CATTTACGAA 
AGCCAATGAA TCGAAAGTTT CGAGCTTGAC GTACCTAATA AAATGGAACG 
CAAAACCACT CAAAGGTGAA TCCTTTACGA AGAGACCGAA ACGAAATTAG 
AAGACGATTT AAACGATTCG CAGAGATCTC TCTCTATATC CGTTGATTGT 
GGAAAGTTTC GTTGCGAAAA ATCGTTTTTT TTTTCCCGGT TNCAATNAAA 
AAACNTTTNG ATNCGTTNCC TTTTTTTNGN AATAAAAAAA TNCGGNCGNG 
NNACCAANTN GGNCGGNACN CNNGGNNAAN CCGTNGGNTN CTTNANNANC 
TNNTNGGNTT TTTTNTNACC GTNCNATTCN NCGGNATNTT NTNNGGNNGG 
ATNNGGANTT NCCANCCNGG GCCGTNNACC CCNGGGCCCC TTTTAA

AT5G56210.1

Model type: Protein coding
Short Description: WPP domain interacting protein 2
Computational Description: WPP domain interacting protein 2 (WIP2); BEST Arabidopsis thaliana protein match is: WPP domain interacting protein 1 (TAIR:AT4G26455.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G56320.1

Model type: Protein coding
Short Description: expansin A14
Curator Summary: member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Computational Description: expansin A14 (EXPA14); INVOLVED IN: plant-type cell wall modification involved in multidimensional cell growth, unidimensional cell growth, plant-type cell wall loosening; LOCATED IN: endomembrane system, extracellular region; EXPRESSED IN: root, stamen; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Barwin-related endoglucanase (InterPro:IPR009009), Pollen allergen, N-terminal (InterPro:IPR014734), Expansin (InterPro:IPR002963), Rare lipoprotein A (InterPro:IPR005132), Expansin/Lol pI (InterPro:IPR007118), Expansin 45, endoglucanase-like (InterPro:IPR007112), Pollen allergen/expansin, C-terminal (InterPro:IPR007117); BEST Arabidopsis thaliana protein match is: expansin A15 (TAIR:AT2G03090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G56325.1

Model type: Protein coding
Short Description: FBD-like domain family protein
Computational Description: FBD-like domain family protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), FBD-like (InterPro:IPR006566); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT5G56390.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR