1. Home
  2. Mutant Lines
  3. 53-3649-1

53-3649-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24214823 [Map]; Strand: w
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-3649-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATTTTG ATGATGTCCT TGCTTTGCTC TGAACTTCTC 
    TTAAGCCTCT TACACGTAGT CTCATGGTCA AAGATACAGA AATTAAAAAA 
    ATGAGAGCCA TCAAACTCAA ATGACAAGAG ATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24214769 [Map]; Strand: w
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-3649-1 - 3-prime edge 
    TGTAGTGGGA TCTGATTGTG AAGAAGAATC TCAGGCTAGT GATGATGTTA 
    TCGTTCTTAA TAGTGATGAT TCTGACGATT CTGATAATGA TTATTCTGTT 
    GAGGATGATA ATGTTGCCTG AGGATGATGA TGGTCTTGAG GATGA

AT5G60140.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR