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Mutant Lines
53-3654-1

53-3654-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 14808597 [Map]; Strand: w
- AT2G35130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon6 (CDS)
- AT2G35130.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon7 (CDS)

CTATACATCA GGTTCAAGCC CATCTTCTTG AAGCTGTTCA AATATTTCTT 
CANCTTTCTC GNNAAGACCT TCTCTAGCAA ATGCATTCAC AAGCGCTGTG 
TATGTGCAGA TGTTCGGTTT ACATTGGTGA CTTCTCATTT CACAATACAA 
TTTCCAGGAC ATATATGATT TACTTGCCTG CAAGAAAATC AATGACATGA 
ATATGAAATT TCCGAAACCC CAATGTATTC ATAGCAAACA AAGTTAGACT 
ATAAACCTTT CCGTATAAAT TTATCATCAA GTTGTAAGTT TCAGTGGTTG 
GTTTGCATCG ATCACGCTTC ATCCTNTGGA AAACATCAAT CGCTTCTTCG 
GTGTTTCCTT TTCTCTTCAT TAACCCCTCA ATATAGGCAT TGTATACAGT 
TACACCTATA GTTTCTCAAA ACAAGAAAAT GTTAATTACA AGAATGACTG 
AAAACTATGA GCCAGTGTTT GGTACCAATG CATATAAAAA GCTTAGGAGA 
TGCAAAGACA TACTTGGAGA AACATGATGA TTTTGCATCT CGA

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 14808483 [Map]; Strand: w
  - AT2G35130.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: 0; Region: intron6 (CDS)
  - AT2G35130.2 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
    Distance: 0; Region: intron7 (CDS)
Flanking Genome Sequence: 53-3654-1 - 3-prime edge
```
ATGAAAATAT GTCTATAACG CTCTCATGGA GTCATATAGG TGATTACCCT 
AACTCTCCCA TAGAAGAATG ATTGCAGGCA ATCGATGAAG CTGAAATGTA 
ACGCCCTCAA AATCCGGAGA CAGTCGTGCA GGTTATCCAT ATGGTGCTGC 
TGAGATTTTC TCTCTAATGC AACATATGGG ATGTGAACCA GACAGAGCTT 
CCTACAATAT CATGGTTGAT GCATATGGCA GAGCAGGTCT TCACTCAGGT 
AACCAAAAAG CT
```

AT2G35130.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1); Has 54782 Blast hits to 14810 proteins in 305 species: Archae - 4; Bacteria - 41; Metazoa - 619; Fungi - 795; Plants - 51459; Viruses - 0; Other Eukaryotes - 1864 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G35130.2

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT5G02860.1).
Link: InterPro Scan - TAIR