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53-3659-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9591048 [Map]; Strand: c
      • AT1G27580.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3659-1 - 5-prime edge 
    TGCTCAATTT TTTCAGCACG AGATAATCGA TCTCCGTCCC AATAATGCAA 
    AGGTCTACTA CGCTAACGCT TGACTCTGCT AAGGCTCTGC GTTCGAATTT 
    GATTCAGCGG CCAAAAGCCA GATCTCCATT GCNTGATGCT TTTCTGCAGA 
    AAAGGATGGT TGTCGTAGTA ATAGTGTGTA CAACCCATAC AATGATAGGG 
    TTTACGAGAC GAAGAGTGAC TTTTCAGGGT ATCGATTCCT GGGAAACTCA 
    GGTAAGTGGT TTCTGGTGGT AGATTCCCGA ATGAAACTCT ATATTATAGA 
    TGTATTTAGC GAGAAGAGGA TCGATCTTCC ACCACTAGAA TCATTTAAGG 
    GTAGCCATTT TAAGATTTGG CGTGAAGGAG AGGAGAATGT CAAGCATATG 
    CTAATGGATG ATGAGGATCC ATTTCGTGAT GAATTTCCTC ATGCTGCCGA 
    AGATCTGAGA GGTCGTTTGT GGGTTGACGA CAAGAATGGA AACTACGTTG 
    TTGTGTGGCA GTTTGAAATG TACCCATTTC TA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 9591183 [Map]; Strand: c
      • AT1G27580.1 - [+] show detail - Protein of unknown function (DUF295)
        Distance: -108; Region: promoter
      • AT1G27590.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3453 (InterPro:IPR...
        Distance: -945; Region: promoter
    Flanking Genome Sequence: 53-3659-1 - 3-prime edge 
    GTGCACACTG TGTGTAAATA TAGGTACCAA GCCCAATAAC AGCAACAAAA 
    AATATTCTAA CGGGTCTGTG GCCCAATATA ACATCATCAT GAATTATTTT 
    TGGTTATTCA AGATTTTGAG AAACGTTTGT GTGTAAACTC ATAGTCGTAG 
    TTATTCAAGA TTCTCTTGAT ATTTTCAAGT TGAATTTTGC AAGAGATACT 
    CTCAGTTGTA CAAGCTTCAT TGGTGTCATT AGCATATGTC AGATCAGTGA 
    TAGTGTTGAT GGGTTCTCAA GAAGGTATTA ATATTATGAG GTTGGGAAAA 
    AGATATAGAA TTCTTTATGA ATTGAAAGGA ACCTAT

AT1G27580.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF295)
Computational Description
Protein of unknown function (DUF295); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF295) (TAIR:AT1G27540.1); Has 231 Blast hits to 231 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 231; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G27590.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana protein match is: phosphatidylinositol 3- and 4-kinase family protein (TAIR:AT1G27570.1); Has 109 Blast hits to 109 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR