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53-3695-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24207742 [Map]; Strand: c
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (5UTR)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: -44; Region: promoter
    Flanking Genome Sequence: 53-3695-1 - 5-prime edge 
    GATTTGAAGA GACAAAATAG CTATCGCCGG ACGAAAGAGA TAATCGTCGG 
    CGATTAGAGA AAATAAAAAG AGAACGGGGA ATGATGATGG GACGTAAGCC 
    TGTGGGTTAG TGGCAACAAA GGAACATTTT AACATTTATT TATTCCTTCC 
    ATCTTTCTCG GCAATTGGAT ACCGGTTTTG CCTGTTTCCG GTTTAAAGTA 
    AAAACGTGCT ACTTGTAAAT GGCTTCATGT CCGGGAAATC TACATGGATC 
    AGCAATGAGT ATGATGGTCA ATATGGAGAA AAAGAAAGAG TAATTACCAA 
    TTTTTTTTCA ATTCAAAAAT GTAGATGTCC GCAGCGTTAT TATAAAATGA 
    AAGTACATTT TGATAAAACG ACAAATTACG ATCCGTCGTA TTTATAGGCG 
    AAAGCAATAA ACAAATTATT CTAATTCGGA AATCTTTATT TCGACGTGTC 
    TACATTCACG TCCAAATGGG GGCTTAGATG AGAAACTTCA CGATCGCCTC 
    GAGGCCGACC AACCGCAAGC GTTGTCAGTG TTGCAAAGCG CTCTGTGTGG 
    GCCTACTTTA ATTGCTTCCA GTGTTAAATT GGCGAAAGGC AATAATATCG 
    CAAAATATTG TGTTGTAAAA TGTAATTATG TTTTAATTTC ATGGNAAATG 
    TTTGAGCATA ATTTTTATTA ATGTACTAAA TTACTGGTTT G

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24207858 [Map]; Strand: c
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (5UTR)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3695-1 - 3-prime edge 
    TTCAAATCCC CATAGACCAA TACTCAACTC TTCATCTCCA TGTCTCCTCA 
    ATCTCATTTC TCTCCTTAGT GATTGAGCTT TTTCCTTCTT TCTCTTTGGT 
    TATTATTCCT TCTCCTCCTC CGTCGTGTTT TTGATTGATT TCAGAATCTA 
    AATCTCCGTT TGATTTCTCC ATACTCGTGC TGATTTTCAC CTATGTAATG 
    TGATTTATGA GCTCTGTTTA TTTCAAATCG ACGGCGATCG TTGAATTTAT 
    TGATCAATGT GTAAGTAAGA GCTTGAAGAA ATAGTTTTTG TTGTTGTTGT 
    GAAAGCTCAG AGTTTTGTTT GCTTTTTTTG TTGACTTTTT TGAGATTGAT 
    GCTGGATCTC AATCTCGACG TCGACTCGAC CGAGTCTACT CAGAACGAAC 
    GAGATTCGAT TACTGTTAAA GGGGTTTCTT TGAATCAGAT GGATGAATCG 
    GTGACGTCGA ACTCTTCTGT TGTTAATGCT GAAGCT

AT5G60120.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60120.2

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).
Link
InterPro Scan - TAIR