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53-3726-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 54440 [Map]; Strand: w
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -991; Region: promoter
    Flanking Genome Sequence: 53-3726-1 - 5-prime edge 
    GAAATACCGC GTTGTTAATA AGCTGACTTG ACTTGTAAAT AGATAAAGGA 
    AGAAAAAAGG CCAAAAGAGA AAACACAAAA GACTAAAGAT AAGAACAAAA 
    GAAACATGTA ACCTGATTTT CAAGGACATG AGTATGGTCT ATGTATATAA 
    ATTCATAAAT ATATAGCGTA ATATGGAACT AGATAATAAG AGTAGTGAAG 
    TGTATATGTA CGTGTATACA ACTTAAGCAA TATAAAGGCA TGCATAGAGA 
    TGGAAATAAA CATGTGTAGA GTTTGATGAT CTAACATTAA TAAAGGATTC 
    CACTGTTACG AATCTTGATG AACTTGAGTA GAGTTTGTTT ATTGAAATAA 
    ATAGACTAAC TAAGAAAATA AATGAAGTAC TTGTAAAGTG AGAGGTTGAG 
    GAGCAGATAT GGTGGGCAAG CT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 54369 [Map]; Strand: w
      • AT4G00140.1 - [+] show detail - Calcium-binding EF-hand family protein
        Distance: -920; Region: promoter
    Flanking Genome Sequence: 53-3726-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTCCATCCCC ACAAAATCTT CTTATGGCTA CTTTTATATA TATATACATA 
    TCAAACTATA CGTGACGACA AAATAAATAA ATTAAGAAAA AAAAAAANAA 
    AAAGGGGGNG TGGGCCATGC NTTATNTTNC CAANAACNCG NTTTNACNCC 
    NTTCGCNTNG NNCTCTNTCC TTCCTTGATN TGATCATNTA AAACNAANGG 
    GGGAANCTTT NTTATTTNGT NNGGATCGTN TCCCCAATNN GGNNGGACAA 
    AACTAATNTG TTTNAAACAA AATNCNTGAA ATNTCCCNCA ANAANCAAAN 
    CAANCTNTAA AAAAAATANN GNGGNAANCC CGGAAAATNT CNCNTNTCCA 
    AATCCTTTTT NGGANGNGTT TNNAANCCTT NNAATNAAAT NTGNCCNCCC 
    TCNATNTGTA AAANCANCTN GCCCCNTCNC ANTTTTNATC NTAAAATCCC 
    ANCGTCCNGT TANCCTAANG ANAAATCNCC CAANCANAGG NGTTNAAATC 
    NANTTNTGTT GNANGGGATT TTTTNTCCAA NGGAAANAAA TTNAATTNGA 
    NGGNAATNAC CANCCNGGGC CGTNACCCGG GGNNNCNTTT TTAAA

AT4G00140.1

Model type
Protein coding
Short Description
Calcium-binding EF-hand family protein
Computational Description
embryo sac development arrest 34 (EDA34); INVOLVED IN: polar nucleus fusion; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: calmodulin-related (TAIR:AT1G73440.1); Has 80 Blast hits to 56 proteins in 14 species: Archae - 3; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR