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53-3727-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24129384 [Map]; Strand: c
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3727-1 - 5-prime edge 
    GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCC CAGATAAAGC ATATTTTCAG CTGGTATATT 
    TCCACATAAA AGACAACTTT TCTCGGCATC ATCCGTAAGT GACTCAGATG 
    TGATTAACTT GAGAGGATGA ATAGAATGAC AAGGATGATT TACCTCTTCC 
    GAGAGATGGA CGCAGTTCAC GTGGAAATAC ATATCGCATT CAAGACATGA 
    ATAGGATGGA CCTTCAATAG ACTCCTTGCA TAATTCACAA GGAACCTTCT 
    CCTCTCGTAT CTTCAAGAAG ACGACAGCAT GATCATGACA CAGCGGATGT 
    TCGATAGCAG GCGGTGACGG TTTCATACCA CAAGTCAAAT CCACCTTGAA 
    CTCACATGTG GGACAACTAT AACAGGGAGT CAATAGCTTT TGTCCACACA 
    AATCACATGG ACCATCTTTC GAGTCATTGG TGAGCAGGAG AGGATGTTCA 
    GGGTGGGAAC TATGGCTGAT CTCCCCTGGG GCCTCAGCAC AGTCCTTATG 
    GAACCAAACA TAACAGTAAG GTTCATTGCA AAAGTAGCCG GCGTACATGA 
    AACCATTTAC ATGGCAGCCA TCACATTCAT CATCAATACA TCGAGCCGAA 
    GGAAAAAGAG GGTGCTCATG AATTGGTAGG TCTACTGCTT CTGTAGCCAT 
    TCTTTTGATC GGGTACAAAT GAATGAATCA AAGGGGGTTT GTTAATTAGT 
    TTGATGAGAT CTCCAAGTGA AGACGGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24129381 [Map]; Strand: c
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3727-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TTAATTATGT TCCGTTTGCA ATTTCACATC GTGCCTTGGT TGTACCAAAA 
    ACCCACCACT CCTTGTTATT GAGCATATGA AGACCCACAA ACACCCACTT 
    ACTCTCTTAC CTAGAAGAAT CTCATGTATC TGTGACGTTT GTGGGAAGAA 
    ATGCCAGTTT ACGGCGTATG TATGTCTTCA GTGTGATTTT GTTACCGCAA 
    GAAAGTGTAT CGACAGGCCC CGTGTCATCA ATATCAATCG TCATGATCAT 
    CGCATATATT TAACTCATCA TCTCGGCACT GGGTATTCGG AATGCGGAGT 
    TTGTCACAAA AATGTAAGTC AGTACAAGGG GGCTTACTCT TGCTCTGTTT 
    GCCCTAACTA TGCTGTTCAT TCTACATGTG CCGTGAGAAC TGACGTATGG 
    GATGGCGTAG AATTGGAAGG GACCACTGAG ATCACAGAAG ACATTTCACC 
    ATTCAAGGTG GTGGGTGATA ACTTGATATG CCATTTTAGT CATGAAGAGC 
    ATCAATTAAA GCT

AT5G59920.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Curator Summary
Isolated in a screen for UV-B insensitive mutants using a hypocotyl growth inhibition assay. Mutants are defective in a number of UV-B responses.
Computational Description
UV-B LIGHT INSENSITIVE 3 (ULI3); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type (InterPro:IPR001965), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR