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53-3733-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24036052 [Map]; Strand: c
      • AT5G59660.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3733-2 - 5-prime edge 
    CCCTTCTCAA CGTTTAGATT GTAGCAGTTC CGAATTCCAT CTGGAAAATA 
    TCTCAACGTC TCGTATGGCT TCAGGTATCC CTCTCTATTT GGTTTGATTC 
    GGCCAGCTTT TCCGCTTTGG ATGAACTTTT CGTCAGATAA GAACCGTAAA 
    CCTGTCGTCG GCTCATCATA AGGAGACAGT TCATTCGCCG GTAGCCCGCA 
    ATCCAAACTG ATGAAACCTG CTAACAGAAA GAAAAAAAAG ACCGNCAAAA 
    ACATTACATT CTGAGAAATT CTAGAATCTG CAAACACAAG TACCATTTTG 
    GGAGGCGCAT NTCCCNATAA AACAGCTAAN ATGTGAATAC CTTGTTGCTC 
    CTGANCTGGA ACANTATGAA TACTTACCAA GGTTNNTAAT ACCGNNGNNA 
    AAANNGGNCA AGGACNCTCC NTNCNTNGNN CTNCNGNAAA NATATNANAN 
    CATTACNNNG GGNAANNNTT NANANATTAC NNCNGNNAAG GTNNAAAANA 
    NNCNTNNCCG GANANNGAAN GAAAAAAAAG GGGCGGGGNT NNGGNAGGNG 
    NAGGNNNNNN NNNGNNANAA GGGGGGGGGG GGNNNTNNNT NNNAAAAANN 
    NANAANNGGG G

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24016866 [Map]; Strand: c
      • AT5G59613.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -256; Region: promoter
      • AT5G59613.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -366; Region: promoter
      • AT5G59616.1 - [+] show detail - Interleukin-1 receptor-associated kinase 4 protein
        Distance: -645; Region: promoter
    Flanking Genome Sequence: 53-3733-2 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCAGGGA 
    ATAACACATT TGATCAGGGC TTACTTTATC TATGGAAATT ATGATGGTCT 
    TGACATTAAT CCAAAGTTTG ATCTGTATCT TGGACCTAAT CCATGGACAA 
    CGATAGATTT GCAAAAAGAA GTGAGTGGTA CACNGGGCNG GAGATCTTTC 
    ATATTCCAAT ATCAAACTCA TTGCACGTTT GTCTTGTTAA GACCGGGACA 
    ACTACTCCGC TAATAACCAC CTTGGAGATA AGGCCTATGG GAAATGGAAC 
    TTACATTACT AAGTCTGGTT CTCTGAATCT TTACTTTCGG CTATACCTTA 
    GCAAATCAGA CGGTTACATA AGGTAATTAA ATTTCAACTG AAACTCTTCT 
    CTTCTTTCTG CTCTGGTTTT ATACTCTGTT TCTTATTGCT CTGTTCTCCT 
    CTGTATTTGG CTATGTCAAA AAGTTGATAT TTGCCATCGT ATGTACTCAT 
    TCCACTGCTA AAACAAAGTT GTTTGTGTCA CAAGGTACCG GAATGATGTC 
    TATGATCGTG TATGGACTAC GTTTTCAAGG AATGAATGGA ACCACATTTC 
    CACCACCCTG GAAGTGAGCA ATTCAAATAA GTATTTTCCA CCAAAAGAAG 
    CACTCAAAAC TGCTGCAATA CCTTCTAATT CAAGTGCACC ATTGACGATG 
    GAATGGAGTT CGAGTAATGT CAATAACCAA TATTACTTGT ATGGACATTT 
    TGCTGAGATC CAAGAGTT

AT5G59613.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59613.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial respiratory chain complex III; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1).
Link
InterPro Scan - TAIR

AT5G59616.1

Model type
Protein coding
Short Description
Interleukin-1 receptor-associated kinase 4 protein
Computational Description
Interleukin-1 receptor-associated kinase 4 protein; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59660.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR