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53-3735-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23398754 [Map]; Strand: w
      • AT3G63340.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -377; Region: promoter
      • AT3G63340.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -377; Region: promoter
      • AT3G63350.1 - [+] show detail - winged-helix DNA-binding transcription factor family protein
        Distance: -714; Region: promoter
    Flanking Genome Sequence: 53-3735-1 - 5-prime edge 
    TCCACGAGAC AACCAAAATA CGACGTGGCA ATTTTTTACC TTTTGTGACG 
    TGTTAACTTA ACTTCTTTCC CACATCCGAA AGGAAACTTT GGAATCTACT 
    CCTTCTTGGA AAAATCCAAA TGTGCCAATC ACTTGTGTGT ATATCGTCTT 
    TTCTATTTAC CAAGACCTCA AAGCTACTAC TATTTCTTTT CTTCTTTTTT 
    TTACCTTTGT AGCTAGTTTT ACTCGTCAGT CGTCACTTTA CTACATTAAA 
    GCTATCCGAT TGATGCCACG TAGTCCCGAC CGGTCCGGTG AGGTGGTCAA 
    CTTTTTGTAT ACCTGGTTTC AATATATATT ACTTCGATAT GTAAATCATG 
    GGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 23398638 [Map]; Strand: w
      • AT3G63340.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -261; Region: promoter
      • AT3G63340.2 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -261; Region: promoter
      • AT3G63350.1 - [+] show detail - winged-helix DNA-binding transcription factor family protein
        Distance: -830; Region: promoter
    Flanking Genome Sequence: 53-3735-1 - 3-prime edge 
    CTCGTGGAGT GTGCTTGCGA ACATGGTGAC CATGTGGCCG CTTTACACCT 
    CTCGATGCAA ACTCTTTGGA TTATGCTGTA TTATCATGTT ATTGTTAGGA 
    GAAGAACAAG TACTACAAAC CGCAACAGAA CATTCCAAGC CTCATCACAC 
    TAGTCATCCA ATTTGGTAAC AAACTTACTG CCACGTAGTC CTAGTGGGCT 
    GGGCTTTTAA AGAGGCCTTT TCCCCTTCGA TCATATTTAC TAAACCCGAA 
    ATTAAAAGGC CCAAAAGGAA CCCTTTGGAT GAAGTCAAAG GTTCTCGACT 
    TCTTTCTTCT TCCTCTTCTT CTTCGTTTTC AGGCGGGTGG AGGAGCTCAG 
    AGCCTTCCAG AGGTAACCAA CCTTTTATTA CCGACAAGAT TCTGCCACAC 
    AATTATTACA TATTTTTGTT CCCATGAAGC AATTGTTCCT TTCAAGCATG 
    TTTACGAGCA AAAGAGTGAA AGGGTAGCTT GATTTTTGTC TACTCTAGCT 
    TCATTTTCTG GCGTTCTTTA CTTGAGATTT AAACATTTTG CTCTCGGATT 
    GATAATAAAG AAGAATTTGG AATATCATTA GGTTTGGTTA GGACTCTCGG 
    ATTCTGTTGT CGGTTAGATA TTTGTTTTGT TTAATCCCTA GATTTAGCAG 
    AGAAATCCCT CAAATCTCAC ACAAACCATG TAAGGAAGAA GATGACCTNC 
    AGTATCAAAT CAAGTC

AT3G63340.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein serine/threonine phosphatase activity, protein kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G63320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G63340.2

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein serine/threonine phosphatase activity, protein kinase activity, catalytic activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein phosphatase 2C-related (InterPro:IPR001932), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Protein phosphatase 2C, N-terminal (InterPro:IPR014045), Protein phosphatase 2C (InterPro:IPR015655); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT3G63320.1).
Link
InterPro Scan - TAIR

AT3G63350.1

Model type
Protein coding
Short Description
winged-helix DNA-binding transcription factor family protein
Curator Summary
member of Heat Stress Transcription Factor (Hsf) family
Computational Description
AT-HSFA7B; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to high light intensity, response to heat, regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: root, pedicel, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Heat shock factor (HSF)-type, DNA-binding (InterPro:IPR000232); BEST Arabidopsis thaliana protein match is: heat shock transcription factor A7A (TAIR:AT3G51910.1); Has 2113 Blast hits to 2100 proteins in 228 species: Archae - 0; Bacteria - 6; Metazoa - 325; Fungi - 481; Plants - 785; Viruses - 0; Other Eukaryotes - 516 (source: NCBI BLink).
Link
InterPro Scan - TAIR