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53-3737-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18075624 [Map]; Strand: c
      • AT2G43560.1 - [+] show detail - FKBP-like peptidyl-prolyl cis-trans isomerase family protein
        Distance: -126; Region: promoter
    Flanking Genome Sequence: 53-3737-1 - 5-prime edge 
    GGAGGAAGAA TGTGAAATGA CGACGTTTTA ACGAGAGGTG AAGTAGACCC 
    CACACGAGAA ACTACTTGTC GTTTCAATCA AACAGAAGTA AACAATTACA 
    GATATTTACT TGCCGTTTCA ACTTCCGGAT GGTCCACTCC TTAACGTTCA 
    TATTTCCTTA ACGAAATTAA AAAACAAATG AAAAATTTAA GAAACTACGA 
    GAGCCAAGTC AGCAAGAAGC GAACGCACAA ACAAAACAAA ACCAGAGATT 
    TCGTTATCCA CTGAAGTTCG TTTGCTTCTG TCAAATTTGC CAAATCGTAA 
    CCAAAAAAAG ATGGCAGCTT CTTCTCCATC TCTCCTTCTA CCACTAGGTA 
    AGAACCTAAG CTACTGATTC TGTTTTCTGA TTTCTTCTCA AAGATTAGAT 
    TTCTCGTCTT GGAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18075740 [Map]; Strand: c
      • AT2G43560.1 - [+] show detail - FKBP-like peptidyl-prolyl cis-trans isomerase family protein
        Distance: -242; Region: promoter
    Flanking Genome Sequence: 53-3737-1 - 3-prime edge 
    CTTCCTCCGG CGGTCCAAAT GTGCATTGGA CTATTGGTGA TTGGCGTTGG 
    CTTTTAAAGC T

AT2G43560.1

Model type
Protein coding
Short Description
FKBP-like peptidyl-prolyl cis-trans isomerase family protein
Computational Description
FKBP-like peptidyl-prolyl cis-trans isomerase family protein; FUNCTIONS IN: FK506 binding, peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Peptidyl-prolyl cis-trans isomerase, FKBP-type (InterPro:IPR001179); BEST Arabidopsis thaliana protein match is: FK506-binding protein 13 (TAIR:AT5G45680.1); Has 8823 Blast hits to 8572 proteins in 1646 species: Archae - 42; Bacteria - 4685; Metazoa - 1489; Fungi - 464; Plants - 749; Viruses - 0; Other Eukaryotes - 1394 (source: NCBI BLink).
Link
InterPro Scan - TAIR