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53-3786-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4636647 [Map]; Strand: c
      • AT1G13540.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3786-1 - 5-prime edge
    GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT ACTCCTGAGG GTCCAAATTC TGGAATTTTG
    GTAATCCAAG ACCAACACTC ACGGACACGG GCTACATCTT GCTTCGGCTC
    GTGGTTGGTT GTGGACTCTT CTCTAAGTGG TTTGCCATTG CCCCAAAATC
    TTAAGCTAGC AGTCACATTC AATATTGGAG GTGATGACAG CACTCGTGAC
    CCAGTTGTGT TCATTCCTGT TCTTGATAAG CCTCTATCTT CAAACTGTTA
    TTACGCTATT AAACGGCATG GGAAGCATTC AGGGTATGAA GTTTAATCCG
    CAAATCTGAA ATTCTTGAAT CTTTCTTCTT ATATAACCTG AAAAAGTTTA
    TAAAATTTTG GTTGCATTGC AGGGAAGCGT CTGGAAGTGC AAAAGAGGAC
    GATATAGTCT CCTGCTGCTT TTGCTCTAGT TTTGTTCCTG AAGCCAAACC
    AAAACAGTTA GATCCTTTTG ACATGTACCA ACAATTCAAG ATCCATCAAA
    AGGAGCCTTC CTCGCGTTGT TACTACGCAA CATCTGTCGC TCCTGACGGG
    GTCCCACCAT GGTTTCTGAG GAAAAAAGAG TGGACGGTTG AATACTCGAG
    GTTCCAAGAC TTTGAACTGA GAGATGATGC AAAAGGACTC ATCACAGAGC
    TTCGTACTGA GCTTCCTCTT CTTGGTATGA GCACTGTGGT TGGGAAGTGG
    TATGTCCCTT TCATA
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 4636640 [Map]; Strand: c
      • AT1G13540.1 - [+] show detail - Protein of unknown function (DUF1262)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3786-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TGCTCAGGAG GAGGCTGTGT TAGCTCTGCT GGATTCCTCC GGTACTCTGA
    GAAACTCCTT GTGATGTACA TTGTTTCACT AAATCGAGTT TTGGACTTGG
    AGAAAAACTT GATCCTATAT TATAGAGTAA ACAACTCTGT AGAACAGCAA
    CNTGACAAGG TGACTTGACT TTTCTGGATG GCTCGTTGTA GGAAACTTCA
    AAGAAACTTA CTTGATCTCC TTAAAGATCC TAGCCTACCC TAATTTCACC
    TCTCATCAAG TGTCTCTAAA ATAAGATAAA CAAAGTCTTC GCCTCTCTGT
    ATCATGACAC CACTCTGCAT CATGAAGTAT TCAACGCTCC AACAACTCTG
    AAAGATGACA TTTTTATTTT CATTTTAAAC AGAGTTTACA TCAATGTAAA
    AGCAGAAGAC TAAATAAAAG AGAGAAGCTC ACAAGTCAAT ATTGGATAGT
    CCTCAACTTA TCAGCATGTC TAAACTCATA TGTCAACACC AAACTCTCAT
    CCATTCTTTT CAATTCAAAT CTCTCTACCA ATACATAACA TTTATAACTC
    TTCCAATGCG ATGAACCGCC TTCGAACCGA TCCAATCTCT TAACCGTCAC
    TCGGTTTCCG TCTACCTTCT TCCACCCGAA ACTCTCCTCT TCACTTTCCA
    TCCTCTCCAC AACCACTGAC CTTAAACCTA TCTTCTTGTC TTTAACTTGG
    AACCAAACAA TCCCT

AT1G13540.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1262)
Computational Description
Protein of unknown function (DUF1262); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1262 (InterPro:IPR010683); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1262) (TAIR:AT1G13510.1); Has 101 Blast hits to 94 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR