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53-3804-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22229021 [Map]; Strand: w
      • AT3G60160.1 - [+] show detail - multidrug resistance-associated protein 9
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3804-1 - 5-prime edge
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCTTA TACGTNCCTT CAAGCAAAGT GAGTTTCCTA
    GTTGCAACCA TTGCGTCGTC AGGAGACGAG AACCAGTTTC TGCTGCTCAT
    ATCAAAGCAA ACACAATCAG GTAAAACGAA AAAAAATATC ATTTTTTCGA
    GTGAAAGAGT AACAACTTTA CCTGCGAAAC CAAAGGGCTT GAACATAGCT
    TCTTTCTTGG GTTGAGAAGA CACGTGTCTT CGTACCGAGA GTCTAAGTGA
    GAAGCACTAG AGATGATTGG AGACGATGAA GTTTCTGTTT TGTTTTCAGA
    TGGAGTTGCA GGAGCCGGAG AGAATGTGAG ACAAGTTTTG AGTTTATAGA
    GAAAAGTGAT GCCAGCTACA AAACAAAACA AAAACCCTAT TGAATATATG
    ATTGATAAGT TTGGGGACAT TGGAGAAAAA CAAATTGAAT T

AT3G60160.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 9
Curator Summary
member of MRP subfamily
Computational Description
multidrug resistance-associated protein 9 (MRP9); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to nematode; LOCATED IN: integral to membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 15 (TAIR:AT3G60970.1); Has 679468 Blast hits to 355652 proteins in 3947 species: Archae - 12543; Bacteria - 548953; Metazoa - 12500; Fungi - 7906; Plants - 6622; Viruses - 19; Other Eukaryotes - 90925 (source: NCBI BLink).
Link
InterPro Scan - TAIR