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53-3807-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 84881 [Map]; Strand: c
      • AT4G00200.1 - [+] show detail - AT hook motif DNA-binding family protein
        Distance: -187; Region: promoter
    Flanking Genome Sequence: 53-3807-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    AGCGTAAGTT TTCTTCTTGA CATTAATATC TCTTATTACA ATTTAAAATT 
    CAATTATTTT GCAACAATAT GCTTATGTTG GTTCACACAA GAGTTTACTA 
    GGAATGTGAT TGGTACGTGA CAGATAATAA AGTGACAAGC GGTCAGATTA 
    ACAAGCCGTT TGTTTGACCT TCTCTGCCTT CTGTCTCCTT TTTGACTCAC 
    TCTGACTCTT TCTCTTATAT TGCTTTCACT TCCAAGAAAA GAATAGAGCA 
    TTTGTGATTT TAAATCATTG TGTGTTAAAT AAGAATTTAT CCGTATCTCA 
    ATTAGGATCA CGGCACATGA GAAAGCT

AT4G00200.1

Model type
Protein coding
Short Description
AT hook motif DNA-binding family protein
Computational Description
AT hook motif DNA-binding family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF296 (InterPro:IPR005175), AT hook, DNA-binding motif (InterPro:IPR017956); BEST Arabidopsis thaliana protein match is: AT-hook motif nuclear-localized protein 1 (TAIR:AT4G12080.1); Has 772 Blast hits to 768 proteins in 34 species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi - 0; Plants - 749; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR