1. Home
  2. Mutant Lines
  3. 53-3840-1

53-3840-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24045061 [Map]; Strand: c
      • AT5G59670.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: intron12 (CDS)
    Flanking Genome Sequence: 53-3840-1 - 5-prime edge 
    ATCCCGAAGC TGTAGACATC ACTCTTCTCA GCCAACCTAT TTGTACGGTA 
    ATATCTGCAA AACAAGTGTA TATTACTCAT TAACCATCAA AGACAGAATA 
    TTAAATTTCA GAACAAGTAT TTACNGTGTG TATATGAAAA CTAATAATAC 
    TTACTCGGGA TCAAGGTATC CAGGAGTGCC AGCGATCACC GTCAATTCCT 
    GAGATTCGCA TCCACCTTGA AAAGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24045177 [Map]; Strand: c
      • AT5G59670.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon13 (CDS)
    Flanking Genome Sequence: 53-3840-1 - 3-prime edge 
    TTCGGGATCG TGTTATTGGA AATGATCACA AACCAACCCG TGATTAATCA 
    AACCTCTGAA AATTCTCTCA TAACACAATG GGTTGGTTTC CAGATCAACC 
    GAGGTGATAT TCATGAGATT ATGGATCCAA ACCTTGGCAA GGATTATGAC 
    ATTAATTCTG CTTGGAGAGC TCTTGAACTG GCAATGTCAT GCGCAAATCC 
    GTCTTCCTTG AATCGACCAT CCATGTCTCA GGTTATACAC GAGCTTAAAG 
    AGTGTATTGC GTGTGAAAAC ACAGGGATAA GTAAGAATCG AGGCTTGGAA 
    TCTCAAGAAA TGAACGTTGA CTTGGACTCT TCCGTGGTTC CCATGGCAAG 
    ATAGTTTTGA GTGTTGTCGA

AT5G59670.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR