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53-3861-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24131132 [Map]; Strand: w
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 244; Region: intergenic
      • AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -3394; Region: intergenic
    Flanking Genome Sequence: 53-3861-1 - 3-prime edge
    AATACAAGAG ACTTCTATAA CGAAGGGAAT GATCTCGTAG TAATTTCATT 
    GATTTACTTT AGGTTCTTCA TTGGTTTTAT GATTCGTTTT GATGCTCTTA
    TATGCCGGTT TGATCAATCT GTGCATCTGT GACTTTTTCA GTATTGGTGT
    ATAATATATA ATAACCAGCA TTTACCATTA GAAAACAAAA ATCACTATGT
    ATTACATATC AGTTCTTGGA AATAAAAAGA GAAATAGGAA CGCTAATGAA
    ATAATACAAG CAAGATAGAA CCACTCATTA TCATCAAAAC GTAAGTTCAA
    ATTTCTTCAC CCAAATAACT CGATAAACAT GATCGGGAGC AGATATACCC
    ATTGTGATCA TCCGACGTAT CATCAGAATC ATCATTAGAA GCATCATCAG
    AAACAACATC AGAAACAACA TCAGAATCAT CATCAGAAGT ATCATCAGAA
    ACATCATTAG AAGGATCATC AGAAACATCA TCAGAAACAT CATCAGAACC
    ATCATCAGAA CCATCTTCAG AATCCTTTAG GATCTTTAGG ATGACGGAGA
    CCTTGCATCG AGAGTTACAC TGGATGCAAA ATGGCCGAGT GTTGATATTG
    TTAGGAACCG CCTCAAACTC GATTTCTTTT TCCCCAAAGG AGTAGATTTG
    TCCTAGCACG AGACGTGAGA AATCTCCTAG TACGCACTGA GCATGCAAGG
    TGACTCCACA ATC

AT5G59920.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Curator Summary
Isolated in a screen for UV-B insensitive mutants using a hypocotyl growth inhibition assay. Mutants are defective in a number of UV-B responses.
Computational Description
UV-B LIGHT INSENSITIVE 3 (ULI3); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type (InterPro:IPR001965), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59930.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR