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53-3862-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5069721 [Map]; Strand: w
      • AT5G15580.1 - [+] show detail - longifolia1
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-3862-1 - 5-prime edge 
    GGGATAAACN ACAAAATCAG GGTTAATACG ATAACGGTCG GTACGGGATT 
    TTCCCATCCT ACTTTCATCC CGTAATGTCG CTGTTCCTCT CATAGTTATA 
    CCTGCTTGTA ACCTCAGTAT CAAGGTTAGA GGCCAAGCTA CCANGCACCC 
    GNGCCAGTAN ACCACGCNTG NCCNTTAAAA GGAAAACNGN NNNCNAAACG 
    TNGNGGANCC TTNAATTGNG AGANGGNTGG GANCGAAAAC CTTCTTTTAA 
    GNGNGGTCAA CCTTCCGGAA AAAAAAAAAA AAACCNAAAA GNTTTAATGG 
    GTNNGGGNCA NCAAAAAAAA TTGGGGGNCN NNTTTTTNCA AANTGGGNAN 
    AAAAAAAAAN TNGGAAAANA ANGNNNNCNN GGGGAANGNN GNCCNNTAAA 
    AAAAANANNT TTTTAAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5069677 [Map]; Strand: w
      • AT5G15580.1 - [+] show detail - longifolia1
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 53-3862-1 - 3-prime edge 
    GGAACTTACG GAGCAGCACA CCCCGAAACA AAGGGTATAA ACTTTTCTCC 
    TAAAGCAAAT TTCTCTTTTA CAAGTTATTC ACAAGTACAT GTTTCACAAG 
    AATCTTGTCC ATTTATCAAT GCAGAGTCCA GACTTGGGAA TGAGGTCGCT 
    GTCAAAACCT CTGAAAGTTA CAGTGGAGCA GCCCAGCCCG GTGTCAGTTC 
    TTGATGTAGC TTTCGACGAA GATGATTCAC CATCCCCTGT GCGGAAGATA 
    TCCATTGTCT TTAAAGGTGA GTCACTGGGA AGGTCCAAAA AATTCAGACT 
    GGCATTCAAC TTTTCTTCGA GCCAAAAAAA GAAATGTTAA ACTACAAGTT 
    CATAAATATT AAACTCGTTA CATTTGTCCA AGATTTATTC AAAACAGATT 
    GCAAGTTTTG ATTTGTTTAA AGTTTCTCAC CTTTACTATC TCTCTTGTCA 
    CAGAGGACGA CAATCTAAGT TCTGAAGAGT CCCATTGGAT GAACAAGAAC 
    AACAACTTAT GTAGATCGAT TGTGTGGCCT GAGAGTAACA CGAGTCTAAA 
    GCAACCTGAT GCTGAACTTA CGGAGGGTTT CATGGAAGAC GATGCCCGAA 
    TT

AT5G15580.1

Model type
Protein coding
Short Description
longifolia1
Curator Summary
Encodes LONGIFOLIA1 (LNG1). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG1 homologue LNG2 (At3g02170) has similar function.
Computational Description
LONGIFOLIA1 (LNG1); BEST Arabidopsis thaliana protein match is: longifolia2 (TAIR:AT3G02170.1); Has 1694 Blast hits to 1037 proteins in 207 species: Archae - 0; Bacteria - 111; Metazoa - 481; Fungi - 158; Plants - 217; Viruses - 11; Other Eukaryotes - 716 (source: NCBI BLink).
Link
InterPro Scan - TAIR