Home
Mutant Lines
53-3900-1

53-3900-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 22240067 [Map]; Strand: w
  - AT5G54740.1 - [+] show detail - seed storage albumin 5
    Distance: -880; Region: promoter
Flanking Genome Sequence: 53-3900-1 - 5-prime edge
```
CGNGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATAAT GTACCTGCGC ACAAAACAAC AAAAATTGAT 
ATTAGTTAAA CCGTTTGTTT GCAATCTCAA GAAAAATATA TGCTATAAGC 
AAAAGTAATT GAGTTTGCCA CAAATTTAAG CT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 22240059 [Map]; Strand: w
- AT5G54740.1 - [+] show detail - seed storage albumin 5
  Distance: -872; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTACATAA 
TCCCAACTCC AATTATTAAA CATTTTTTAG CTGGTGTTGA AGAAACCGGT 
CAATACCAAT TGGTTTATGT TCTCTGGATT TGATTCTACA TTGATCATGC 
CTATACATAT ATGGTGTAAA CAGGTGAAGA AAGTGAACNG GAGAGGAAGT 
AGTGAATATG GATCACCTAC GTAGACTCAT AAAAAAATGT CGCACGGAGG 
ATTTGAGGTT TGACTTAGAA AACGGAAAGG TTATAGTCTT GAACTATAAA 
TATGCAAGAA AAGAAACTTC GTTGATCTTG GAACGTCATA GAATACCATC 
GGACATGTCC TAGATTTTTT AACAAAAACT TTTCTTGGAT TATATGTAAT 
ATGTCATATC TATGACCTAA GAAACTATTG AGAATTAATG ATAATATAGC 
TTATATACTT GGGACGTACA TGTAGCGCAT TAGGATAAGA TCACAATGAT 
TTATTTATCT AAATCAATCT ATTAGTTGTG CGTTTACTTC CGCGATCAAG 
CTAATCCGAA GTAGATGTCA ATTACCAAAA AGAACTTCAA ATGAAAATCG 
AACCAAGAAA ATAAACGAAT TGACATATAC CTATACCATT GTAATGTAAT 
ATAAATTAAG GTTTGTTGTT GGAATTAACA AACAAAATAA ATAAATAAAA 
ATACAAGTCA AGAGCATGCA TGCTGTTGTA GATGCGGAGA CTCGTCTNCA 
TCATTCACTT GACACATGCA CACATTACTG AA

AT5G54740.1

Model type: Protein coding
Short Description: seed storage albumin 5
Computational Description: seed storage albumin 5 (SESA5); FUNCTIONS IN: lipid binding, nutrient reservoir activity; INVOLVED IN: lipid transport, pollen development; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex; CONTAINS InterPro DOMAIN/s: Bifunctional trypsin/alpha-amylase inhibitor (InterPro:IPR013771), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Napin/ Bra allergen (InterPro:IPR000617), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); BEST Arabidopsis thaliana protein match is: seed storage albumin 3 (TAIR:AT4G27160.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR