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53-3909-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24805417 [Map]; Strand: c
      • AT5G61730.1 - [+] show detail - ABC2 homolog 11
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: 53-3909-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA ATAGTACTAT TAGTTGTTTG ACTGGCATAA 
    ATCCAGTCAC TGGTGGGGAT GGTAAGAAAA GCTTTTTGTT TCAGTCTGAA 
    TGAAGCAAGA TTTTGGAAAA ATTTAACTAT TCTAATAAGA TCCATTTTGA 
    TTGACTAAAT TAAAACAGCA AAAATCTATG GAAATTCCAT AAGAAGCTCT 
    GTTGGTATGT CCAACATTCG TAAAATGATA GGAGTTTGTC CTCAGGTATT 
    GNCAATTTTC TTCCTTCATT GTCCTCATCN CACAAAACAA CCTTCTAATC 
    ATTACGCTAG CTTAAAATGG TTTATGACTC TATCACTCTT TTTTTACAGT 
    AANATATTCT NTGGGATGCT CTGNCNAAAG AANANCANCT GCANNTTTTT 
    GATANCAAAA AACANGTTCN NCNNCATNGG NGGNCANNTN GGGGNCNTCC 
    CCCCTNNCCC CNTTNNGTAT ACNNCAAAAA ACAAGNNGGG GGGCNNNNTN 
    TCTCGANCNT TNCTGNGNAA AAAAANNAAA NAAAAAGNAG NGGGGGGGGG 
    GGNNGCNNCC CCCCCNCTNG ANAAAAAAAA AAANNNNGGG NGNGATNTNA 
    AAAGGGNGGG ATTGGNNNNG NNNANGNNNA NTTNTCCNCG NCCGNAAAAN 
    NNCCNGNTGN NNNNGNNGGG GGAGNNNGAA ANNNTAGANA AANGNNNNNN 
    CNNNNNNANT TNNNNNNNAA ANTGNTTTTT TTTANANAAN GGGGGN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24805424 [Map]; Strand: c
      • AT5G61730.1 - [+] show detail - ABC2 homolog 11
        Distance: 0; Region: exon9 (CDS)
    Flanking Genome Sequence: 53-3909-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCT 
    TCCCTGCGCC ATTAGGTCCG AGAAGACAAA ACAACTGATC TTTGGCAATA 
    TTCATCCACA AACCCTGAAA TTTTTTCAAT GAATCAATAG TTGAATAATA 
    AATGTAACTG TTGTAACACT TTTATCTCAA GTCACATGAG CTAGGAACAT 
    CTTTGGCAAA AGCCATACAT TATCGGAAAG CAACATACCT TTACAGCATG 
    AAAAGGCGAA GTTTTGGTGC ATTTGCAGCA TCCAAGCT

AT5G61730.1

Model type
Protein coding
Short Description
ABC2 homolog 11
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 11 (ATH11); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, transporter activity; LOCATED IN: plasma membrane; EXPRESSED IN: male gametophyte, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 15 (TAIR:AT5G61690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR