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53-3910-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26471002 [Map]; Strand: c
      • AT5G66260.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -267; Region: promoter
    Flanking Genome Sequence: 53-3910-1 - 5-prime edge 
    GGTCAGGNAC TNNCCNTGNG CNACANTNTA CCGNTNCANA CGNGGATNAC 
    AAANATAGGN CGTGACAACC ACAGNNTTGC CNANATATAT TAAAATCTAA 
    ATGCCACTAT ACAATCTTGG CATCTGCGCG ACAAATTAAA CNTGCGAGTT 
    CCCCATGAAA AATTAAGATC ACGTAATTTT CATAGTTATG AGTGAAGAAA 
    TTTCATCTAC CAGAACCAGA CTACCACATG ATATAGATAT AGAAAATTCA 
    TGTCAGGGAT TTCAAATTGT TGAAGAGAAC ATGGGCGACG ACGGCTCTTC 
    ATGTTCTGTG GATGAAAGAA ATTGGAGCAA TGATGTATTA CAGACAAAAC 
    CCCATTAACG GAAATATAAC AGAATGCCCA TACAGTCTCG TGCAGCCGCC 
    AATCATTAAC CGGTTTTTCG GTCCGACCAA AACCACCTGT TTACAATTCT 
    ACCTAAATAA AGAAGCTGAC GAGTCTCAGC CAATCCTATC AAGCCTAAAA 
    CCCGAAACCC CGAAGCAAGC TACGTTAAGC CAAACAATAA CGCAATTTCA 
    TGTGCTAAGA ATGTACAATC ACATACAGAG TCTTCCAGGA CAAATATTTT 
    GTTGCCTTTA GGATATCAAC AAACATGGAA GTTGTATCAA ATAAGAGTTT 
    CTTTATGTTA CAAGTGGAAG AAAGATTAAG TAGAGCAATA TTCATCTCTA 
    AGCATCATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26471077 [Map]; Strand: c
      • AT5G66260.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -192; Region: promoter
    Flanking Genome Sequence: 53-3910-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCAA 
    AACATCATGT TAACACCAGG TTAATTCTGT ATGTGTGCAA TTAACATGTG 
    AATATATATT TATATATTCC TCATCATTTA TATTTGTGTT TGGGCATATA 
    AATATGAGTC ACCACCACCT ATCTCTTTAT CTATTAAGTC AAACAGAGAA 
    GCAAAAACAC AGTGAGGCAA AAGAAGAAAA AGATATTAGA GATCAATGGG 
    AGTAGAAAGG GGAAGTGGTA AGGGTCTGAA GCAGATGTTA AAGAGATGTT 
    CGAGTTTAGG GAAGAAGAGC AGCGTCGACG TTAACTTCAA CGGCGTCCCC 
    AAAGGTCACT TCGTCGTCTA CGTTGGTCAC TCTAGATCCC GACATGTCAT 
    CCCCATCTCC TTCCTCACGC ACCCCATCTT CCAGGTATAT ACATAAACAT 
    GGATCTTGTT GGTCTCATTT ATTGCATCTA TTTATGTGAT ATACATATAT 
    AAATCTATTA TATTCATGAA ACAGATGTTG CTGCAACAGT CTGAGGAAGA 
    GTTTGGGTTC TTTCAAGACA ATGGCCTAAC CATCCCTTGT GATGAACACT 
    TCTTTCGAGC TCTCATTTCC TCCATTAATC CTTTACCGAG ACAAATTGAA 
    GAAGATCATA TATGTACCTA CTTGCATGTG TTATGTGTAT ATCTTTTCTT 
    CCTAAATTAA TTAGTTCTCT CATGTATTAA TAGTGCATCG ATATCATGTC 
    CTTTGAGAGT TGTAGAGTTC ACGTTAC

AT5G66260.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT4G36110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR