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53-3931-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30192275 [Map]; Strand: w
      • AT1G80300.1 - [+] show detail - nucleotide transporter 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3931-1 - 5-prime edge 
    CTGCTGGCGA CGGAGCTGTC TTCGGCGAAG GCGATTCCGC AGCTGTTGTA 
    GCCTCGCCGA AGATTTTCGG TGTGGAGGTT GCAACCTTGA AAAAGATTAT 
    CCCTTTAGGA TTGATGTTCT TTTGTATTCT TTTCAATTAC ACAATTCTGA 
    GGGATACAAA GGATGTCTTG GTGGTGACGG CGAAAGGAAG TTCTGCTGAG 
    ATTATACCTT TCTTGAAGAC TTGGGTGAAT CTTCCTATGG CCATTGGGTT 
    TATGCTCCTC TACACTAAAC TCTCCAATGT TCTCTCCAAG AAGGCTCTGT 
    TTTACACTGT TATTGTCCCT TTCATCATCT ACTTTGGGGC CTTTGGTTTC 
    GTCATGTACC CTCTCAGCAA CTATATTCAC CCGGAAGCTC TCGCAGATAA 
    GCTCCTTACA ACCCTCGGCC CAAGATTCAT GGGTCCTATT GCAATATTGC 
    GGATTTGGAG TTTCTGTTTG TTTTATGTTA TGGCTGAGCT TTGGGGTAGT 
    GGTGGTGGTC TCAGTTCTCT TCTGGGGCTT TGCTAATCAG GTGACTAAAC 
    TGGTCTATCA TTTGAACTTG TGCTGGTCTA TGGATTTTTG TGTATCTTCA 
    TTTGTTGNTT GACAGATTGG TGTGTTTATG ATTTGATGAT AATAGTCTTT 
    GATTGCTACC GACTTTGATG TGTAATGATG CACTGAATAT GATTACCAGC 
    GGGGATG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30192159 [Map]; Strand: w
      • AT1G80300.1 - [+] show detail - nucleotide transporter 1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3931-1 - 3-prime edge 
    GCCAGCAGCC GCGGCCTCCG CCTTGCATAT GAACTCGGTG CTTCTCTCTT 
    TGTGGGAAAT CGAAATCCCA TGCAGGGTTG GCTCAAAGGT TTGAAATTTC 
    TTGTGCCCGT TAAAGGATAG AGACAACCCA TGTAGATTTC TTGGCTTCGC 
    AGGCGAAAAG TCTCTGCTTT AAGCCATGGG AAGGCNTGAA GTTGGCTTCT 
    CACTCCGATG GGTTTGGTGG GTAAAGAGAG AAGCCCTCTG GTTTGAATCA 
    CAGCTTCCAT CTCTCTATTT CACTCTCTCC CGCAGATACA CAGAAGAAAA 
    AATGGGAGAG AAATGGAGGA GGATGATGAG ATGGAGAGAT GATAAAGGAG 
    ACTGGTTGGT TAGTGCAATG AAAGAATATA GTATCGCCAA TTGAATATTA 
    ACAAATGTGG TGATGTGTAT ATATCCGGTA AAAGGAAAGG ATTTTTTTGA 
    AATTTTCTTT TGCACTTGTA AATGAAATGT GGTAACGCTC ACTGTTTTAA 
    CTTGTGCTTA ATGCAAGGAA AGGCTAATCT TTCGCATTTA TCAAATTTGG 
    TATCGGGGTA GATCAATTTA CGGTGGTGTT GTTGACTGTT GAGGCATGTG 
    AGCTTTTTTC ATGGTAGCCA ACACAGAAAT AGTCTCGAGG GTACCCTTCA 
    AATGACTGTA ATGACCTTTT GGTATTACTT CTTTCTTCTT CTTTTTTTTT 
    TTTTTGTNNN GGAAGGNTTT TTAANATGGN GG

AT1G80300.1

Model type
Protein coding
Short Description
nucleotide transporter 1
Computational Description
nucleotide transporter 1 (NTT1); FUNCTIONS IN: ATP:ADP antiporter activity; INVOLVED IN: transport; LOCATED IN: membrane, chloroplast envelope; EXPRESSED IN: stem, root, guard cell, callus, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: ADP/ATP carrier protein (InterPro:IPR004667); BEST Arabidopsis thaliana protein match is: TLC ATP/ADP transporter (TAIR:AT1G15500.1); Has 784 Blast hits to 777 proteins in 180 species: Archae - 0; Bacteria - 480; Metazoa - 8; Fungi - 28; Plants - 103; Viruses - 0; Other Eukaryotes - 165 (source: NCBI BLink).
Link
InterPro Scan - TAIR