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Mutant Lines
53-3932-1

53-3932-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 3527417 [Map]; Strand: c
- AT5G11090.1 - [+] show detail - serine-rich protein-related
  Distance: 1571; Region: intergenic
- AT5G11100.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
  Distance: -4985; Region: intergenic

CCTTTTAGGC AAGTAGTCGC CGACCTCATA TGATATCACT ATGAATTGAA 
CCATAACTAT GAAAAGGTAT AAAAGAAATA TCTAAGTGAT ATAATAAAAC 
AATAATGTAA CAATATGATG GTGGCATATA CTCTTCCAGG TAAGGAAGAC 
GTGTATCCCA TCTTTCATTC CACTTTTTCC TCTTTATAAA TTGGACGATC 
CCTCTATTTC ACCATTTATT CCTCTTATTC TTTAGGTACA ATTTATTGCT 
AGAATTTTTA CAAAAATATT AGTCGACCAA TGATGTCATG CTGATATTGA 
ATAGGTGGAA AATCATTAAG TTTTTCAACT ACCATTCTTA AATTTACAAT 
AATTTCAAGT ACTTGAGGTG GAGACGACTC ATAACGAAAC ATGTATGACT 
GTATGAGTAT GACATTGGAA ACTATTGGTC ACAAGAGCCA TTTTCCACTT 
CTTCCCTTTT CGAGAGCCGC TAAACAGAAG AAGAAACAAC AGTTTGCAAA 
ACTATAGTCA ATAGTGTTTC ACTCGGTTAG TATCAGTTGG TTGTAGGAAC 
ATACCAAAGC GGAATGAAGT TAAACCGATC AAACCCGAGG GGATACCGTC 
AATCAGAAAA GATCACAAGT CCGGTCCAAC CTTTGTGGTC GCCACACATT 
CTATTCATCA CTAGCCGACT TCTTCTAAGT TCTGACAATA GAAAACCCTT 
TTAAATTATA

3 prime edge [+] show sequence

Chromosome: 5; Position: 3527533 [Map]; Strand: c
- AT5G11090.1 - [+] show detail - serine-rich protein-related
  Distance: 1687; Region: intergenic
- AT5G11100.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
  Distance: -4869; Region: intergenic

CTAAAAGGAA AAATATTAAG AAGAGATATA CATGGAATAT TATATTCGCA 
ATTATTATCA CTATTTTTTG CAAAACGTAG AACAATGAAT GTGTATCAAA 
AAAACAAAAT TTACGCGTGA AGGCGGATTT AGGTGAGGTG GAAACCAAAC 
TTGTTAAGAT TTGAGAACAG AATAAAATCA GAATAAAGTA AGGAATCATC 
TTCCATAATT TAGGGAGATA CTGTTTAAGA GGTGTTTAAT TAAAGATTTC 
ATCTCGTTAA TTTAGAATCT TTCCATGAGT TTAAAATTTA ACAGAAGGCT 
TGTACCATAA TTAAATAGAT TTGCAGAGAT ACGTAGCATA ATTAGTATTA 
AGTAATACAC CTATCTTGAT GGCTGATTAA TTTAGTTTTA ATTATTCCTA 
AGCGTTACTT CTGACTTCAA TCTCATGTTG GCCCTAACGA AGACGTGCTT 
ATTTTTAAAT GGCTTCTCAT AAACACCACC CTTGATGAAA ATTTAAAAGT 
GATATTAAAT TGTGTTTAAC AGAGAGAATG ATGTTATTAA AATCAATGAA 
ATGGTAGTAA CATACATTTG GTGAGGTAAG GTCAGAAAAT GACGAAAGTG 
AGAGTGTATT TTGCGTGGCG GATTGGAAAT TCCTGAAAAA GACTTGAAGA 
TAGGCTTTGC TTGTGTCTGA AGCGTGGGAG TTCAACCAAC NTGGTATTCT 
TTTCTTTTTC TCCACTTGAT ATTCTTT

AT5G11090.1

Model type: Protein coding
Short Description: serine-rich protein-related
Computational Description: serine-rich protein-related; BEST Arabidopsis thaliana protein match is: serine-rich protein-related (TAIR:AT5G25280.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G11100.1

Model type: Protein coding
Short Description: Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description: SYTD; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G05500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR