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53-3954-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24041787 [Map]; Strand: c
      • AT5G59670.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3954-1 - 5-prime edge
    CTCCCCGTAT CCCTCAGGAT TTTCTCTGAT TCGACCAGTT TTTCCGCTCT 
    GTATGAAATT TTCGTCCGAA TAGAACAAAA GTCCAGTTTG AGTCTCTGTA
    TAATGAGACG TCTCATTTGC GGGTAGCCCG CAATCCAAAC TGATGAACCC
    TGTTAACAGA CATGAAAACC TTCTGACAAC CAAAACGTTT GTAAAAGAAT
    AGGAAGGAAG CTNCCANNCC GGGCCGTNAA CCNCNCGGCC NCTATNGCTT
    TGTGTCTNNT AACAAGGANA CACGTACTTA NGCTTACAAG ATCGGGTNGC
    GGCTAAGTNG TTATACTNAA TCATACACAT GACATCAGGT AATATTCGAC
    TTTAAAACAC TAACCAACCT TCTNCTTGCT TTTCAAAGCT ACCANCCNGG
    GCCGTCGNCC ACGCNTGCCC CTATAAGGCC TNNNNNNGAA ATNNGNNNGN
    NGNNNNNCTG NNNCTNGNCN TGCCTNCNNN GGNNGANANN NNTNNNACCA
    TNTNNGANNT NTATNACTGN TNCCACTGNN GCTNNANNGG NNNNNCTNNA
    NNNNNNGATN NNNNNNCNNG NNCNNNNNNC NNC
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24041913 [Map]; Strand: c
      • AT5G59670.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3954-1 - 3-prime edge
    GCTATACGAG ACAGTGAGAT ATTTTCCAGA GGGAATACGG AACTGCTACA 
    ATCTGATTGT GGAGAAAGGA CGTAAATATT TGATCAAGGC TTCCTTTGTA
    TATGGAAATT ATGATGGTCG TAACATTGCA CCGGTGTTTG ATCTTTACCT
    TGGACCTAAT CTATGGCAGG AAATAGACTT ACGACAGGTA AATGGTACAC
    AGGCAGAGAT CTTACACATC CCAACATCAA ACTCGTTGCA GATTTGTCTT
    GTTAATAATG GGACGACTAT ACCTCTAATA TCAACTTTGG AGCTACGGCC
    ATTGGGAAAC GGTTCTTATA TCACTGAGTC TGGTTCCCTG AAACTTTTCA
    TCCGTAGATA TCTTAGCAAG TCAGAATCTA CGCTACGGTA AGTCAACTTT
    TACTGAATAA TATTACAAGA TAATAATGTG ACATCTTATA TACCTATTCT
    AAAACAATTT TGTTTCCCCG CCCCCAGGTA CAGGAAAGAT ATCTATGATC
    GCACATGGGT TCCGTTATTC ATGAAGGAAT GGACACAGAT TTCCACTGAT
    CTCGAAGTGA AGAATGACAA TGATTATGTT CCACCGGAGG TTGCACTGGC
    AACTGCAGCC ACACCCACTG ATGCTAATGC ACCGCTGACG ATTGAATGGA
    CTAATTTCAG AAAATCCTGA TGAACAATAT TACGTGTATA GACACTTTGC
    TGAGATCCAG GACTTGCGGG CTAATGATA

AT5G59670.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR