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53-3954-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24041787 [Map]; Strand: c
      • AT5G59670.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3954-1 - 5-prime edge 
    CTCCCCGTAT CCCTCAGGAT TTTCTCTGAT TCGACCAGTT TTTCCGCTCT 
    GTATGAAATT TTCGTCCGAA TAGAACAAAA GTCCAGTTTG AGTCTCTGTA 
    TAATGAGACG TCTCATTTGC GGGTAGCCCG CAATCCAAAC TGATGAACCC 
    TGTTAACAGA CATGAAAACC TTCTGACAAC CAAAACGTTT GTAAAAGAAT 
    AGGAAGGAAG CTNCCANNCC GGGCCGTNAA CCNCNCGGCC NCTATNGCTT 
    TGTGTCTNNT AACAAGGANA CACGTACTTA NGCTTACAAG ATCGGGTNGC 
    GGCTAAGTNG TTATACTNAA TCATACACAT GACATCAGGT AATATTCGAC 
    TTTAAAACAC TAACCAACCT TCTNCTTGCT TTTCAAAGCT ACCANCCNGG 
    GCCGTCGNCC ACGCNTGCCC CTATAAGGCC TNNNNNNGAA ATNNGNNNGN 
    NGNNNNNCTG NNNCTNGNCN TGCCTNCNNN GGNNGANANN NNTNNNACCA 
    TNTNNGANNT NTATNACTGN TNCCACTGNN GCTNNANNGG NNNNNCTNNA 
    NNNNNNGATN NNNNNNCNNG NNCNNNNNNC NNC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24041913 [Map]; Strand: c
      • AT5G59670.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3954-1 - 3-prime edge 
    GCTATACGAG ACAGTGAGAT ATTTTCCAGA GGGAATACGG AACTGCTACA 
    ATCTGATTGT GGAGAAAGGA CGTAAATATT TGATCAAGGC TTCCTTTGTA 
    TATGGAAATT ATGATGGTCG TAACATTGCA CCGGTGTTTG ATCTTTACCT 
    TGGACCTAAT CTATGGCAGG AAATAGACTT ACGACAGGTA AATGGTACAC 
    AGGCAGAGAT CTTACACATC CCAACATCAA ACTCGTTGCA GATTTGTCTT 
    GTTAATAATG GGACGACTAT ACCTCTAATA TCAACTTTGG AGCTACGGCC 
    ATTGGGAAAC GGTTCTTATA TCACTGAGTC TGGTTCCCTG AAACTTTTCA 
    TCCGTAGATA TCTTAGCAAG TCAGAATCTA CGCTACGGTA AGTCAACTTT 
    TACTGAATAA TATTACAAGA TAATAATGTG ACATCTTATA TACCTATTCT 
    AAAACAATTT TGTTTCCCCG CCCCCAGGTA CAGGAAAGAT ATCTATGATC 
    GCACATGGGT TCCGTTATTC ATGAAGGAAT GGACACAGAT TTCCACTGAT 
    CTCGAAGTGA AGAATGACAA TGATTATGTT CCACCGGAGG TTGCACTGGC 
    AACTGCAGCC ACACCCACTG ATGCTAATGC ACCGCTGACG ATTGAATGGA 
    CTAATTTCAG AAAATCCTGA TGAACAATAT TACGTGTATA GACACTTTGC 
    TGAGATCCAG GACTTGCGGG CTAATGATA

AT5G59670.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR