1. Home
  2. Mutant Lines
  3. 53-3984-1

53-3984-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24207787 [Map]; Strand: w
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (5UTR)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3984-1 - 5-prime edge
    CTTACGTCCC ATCATCATTC CCCGTTCTCT TTTTATTTTC TCTAATCGCC 
    GACGATTATC TCTTTCGTCC GGCGATAGCT ATTTTGTCTC TTCAAATCCC
    CATAGACCAA TACTCAACTC TTCATCTCCA TGTCTCCTCA ATCTCATTTC
    TCTCCTTAGT GATTGAGCTT TTTCCTTCTT TCTCTTTGGT TATTATTCCT
    TCTCCTCCTC CGTCGTGTTT TTGATTGATT TCAGAATCTA AATCTCCGTT
    TGATTTCTCC ATACTCGTGC TGATTTTCAC CTATGTAATG TGATTTATGA
    GCTCTGTTTA TTTCAAATCG ACGGCGATCG TTGAATTTAT TGATCAATGT
    GTAAGTAAGA GCTTGAAGAA ATAGTTTTTG TTGTTGTTGT GAAAGCTCAG
    AGTTTTGTTT GCTTTTTTTG TTGACTTTTT TGAGATTGAT GCTGGATCTC
    AATCTCGACG TCGACTCGAC CGAGTCTACT CAGAACGAAC GAGATTCGAT
    TACTGTTAAA GGGGTTTCTT TGAATCAGAT GGATGAATCG GTGACGTCGA
    ACTCTTCTGT TGTTAATGCT GAAGCT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24207671 [Map]; Strand: w
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: -18; Region: promoter
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: -115; Region: promoter
    Flanking Genome Sequence: 53-3984-1 - 3-prime edge
    GACGTAAGCC TGTGGGTTAG TGGCAACAAA GGAACATTTT AACATTTATT 
    TATTCCTTCC ATCTTTCTCG GCAATTGGAT ACCGGTTTTG CCTGTTTCCG
    GTTTAAAGTA AAAACGTGCT ACTTGTAAAT GGCTTCATGT CCGGGAAATC
    TACATGGATC AGCAATGAGT ATGATGGTCA ATATGGAGAA AAAGAAAGAG
    TAATTACCAA TTTTTTTTCA ATTCAAAAAT GTAGATGTCC GCAGCGTTAT
    TATAAAATGA AAGTACATTT TGATAAAACG ACAAATTACG ATCCGTCGTA
    TTTATAGGCG AAAGCAATAA ACAAATTATT CTAATTCGGA AATCTTTATT
    TCGACGTGTC TACATTCACG TCCAAATGGG GGCTTAGATG AGAAACTTCA
    CGATCGCCTC GAGGCCGACC AACCGCAAGC GTTGTCAGTG TTGCAAAGCG
    CTCTGTGTGG GCCTACTTTA ATTGCTTCCA GTGTTAAATT GGCGAAAGGC
    AATAATATCG CAAAATATTG TGTTGTAAAA TGTAATTATG TTTTAATTTC
    ATGGAAATGT TTGAGCATAA TTTTTATTAA TGTACTAAAT TACTGTTTTG
    TTAAATGCAA TTTTGCTTTC TCGGGATTTT AATATCAAAA TCTATTTAGA
    AATACACAAT ATTTTGTTGC AGGCTTGCTG GAGAATCGAT CTGCTATCAT
    AAAAATTACA AAAAAATTTT ATTTGCCTCA ATAT

AT5G60120.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60120.2

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).
Link
InterPro Scan - TAIR