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53-3984-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24207787 [Map]; Strand: w
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (5UTR)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3984-1 - 5-prime edge 
    CTTACGTCCC ATCATCATTC CCCGTTCTCT TTTTATTTTC TCTAATCGCC 
    GACGATTATC TCTTTCGTCC GGCGATAGCT ATTTTGTCTC TTCAAATCCC 
    CATAGACCAA TACTCAACTC TTCATCTCCA TGTCTCCTCA ATCTCATTTC 
    TCTCCTTAGT GATTGAGCTT TTTCCTTCTT TCTCTTTGGT TATTATTCCT 
    TCTCCTCCTC CGTCGTGTTT TTGATTGATT TCAGAATCTA AATCTCCGTT 
    TGATTTCTCC ATACTCGTGC TGATTTTCAC CTATGTAATG TGATTTATGA 
    GCTCTGTTTA TTTCAAATCG ACGGCGATCG TTGAATTTAT TGATCAATGT 
    GTAAGTAAGA GCTTGAAGAA ATAGTTTTTG TTGTTGTTGT GAAAGCTCAG 
    AGTTTTGTTT GCTTTTTTTG TTGACTTTTT TGAGATTGAT GCTGGATCTC 
    AATCTCGACG TCGACTCGAC CGAGTCTACT CAGAACGAAC GAGATTCGAT 
    TACTGTTAAA GGGGTTTCTT TGAATCAGAT GGATGAATCG GTGACGTCGA 
    ACTCTTCTGT TGTTAATGCT GAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24207671 [Map]; Strand: w
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: -18; Region: promoter
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: -115; Region: promoter
    Flanking Genome Sequence: 53-3984-1 - 3-prime edge 
    GACGTAAGCC TGTGGGTTAG TGGCAACAAA GGAACATTTT AACATTTATT 
    TATTCCTTCC ATCTTTCTCG GCAATTGGAT ACCGGTTTTG CCTGTTTCCG 
    GTTTAAAGTA AAAACGTGCT ACTTGTAAAT GGCTTCATGT CCGGGAAATC 
    TACATGGATC AGCAATGAGT ATGATGGTCA ATATGGAGAA AAAGAAAGAG 
    TAATTACCAA TTTTTTTTCA ATTCAAAAAT GTAGATGTCC GCAGCGTTAT 
    TATAAAATGA AAGTACATTT TGATAAAACG ACAAATTACG ATCCGTCGTA 
    TTTATAGGCG AAAGCAATAA ACAAATTATT CTAATTCGGA AATCTTTATT 
    TCGACGTGTC TACATTCACG TCCAAATGGG GGCTTAGATG AGAAACTTCA 
    CGATCGCCTC GAGGCCGACC AACCGCAAGC GTTGTCAGTG TTGCAAAGCG 
    CTCTGTGTGG GCCTACTTTA ATTGCTTCCA GTGTTAAATT GGCGAAAGGC 
    AATAATATCG CAAAATATTG TGTTGTAAAA TGTAATTATG TTTTAATTTC 
    ATGGAAATGT TTGAGCATAA TTTTTATTAA TGTACTAAAT TACTGTTTTG 
    TTAAATGCAA TTTTGCTTTC TCGGGATTTT AATATCAAAA TCTATTTAGA 
    AATACACAAT ATTTTGTTGC AGGCTTGCTG GAGAATCGAT CTGCTATCAT 
    AAAAATTACA AAAAAATTTT ATTTGCCTCA ATAT

AT5G60120.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60120.2

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).
Link
InterPro Scan - TAIR