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Mutant Lines
53-3995-1

53-3995-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 19607628 [Map]; Strand: c
- AT2G47890.1 - [+] show detail - B-box type zinc finger protein with CCT domain
  Distance: -368; Region: promoter
- AT2G47890.2 - [+] show detail - B-box type zinc finger protein with CCT domain
  Distance: -368; Region: promoter

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCGA CATAGCTAGA ATGCTCGATA CTGAATCTTT 
TCTTCTTATA TTTGTTTTCT GTTTGCCACT ATGTATATTA GGTGAAACAG 
GAAATGGATC CCACCATTAA TTTTTGATAT TGAGTCCAAA TCTGCTTATC 
TCCACTAATA CCTCATCATC GTTCCTCGAT AACTATTACT CCATGAAGGT 
AGTTTTCAAT TAGAGTTATC TCAACCCGTA CTGAATTAAA CCTATTCAAG 
ATTAGCTAAT ACCATACATA GTTTGACTTT TAGGGCACGA TGGAAAAAAA 
GAGACAGGAT GGGCAATATC TAACATTCCA GCGACACTAA TAACATGATC 
TCGACAACTA CTGGCCTACT TCTCTTGAAC AATAACACAT ATCACAAGAT 
AATCTAGCTA GGGTTGCTTT TCCATCCTCG TAACATACTA ACATGGCTAT 
AAAAACTCAT TTTTCAACAA TNGAAATTGA TTCTGAAGCC TTTAATAAAA 
ATACNCACAA CTAAACTGAA ANCAAATGTT CTACCANANA ANNTTGGTGG 
ACTANNCNAT TCGCANGAGC NNANGAAAAN TNNNNAGGGN CCGNNCCCNT 
NNNNANGGGG NGGGGGTNTC AAGAAANNCN CCACCCCCNG NNCCNGGNNG 
GGGGGNAAAN NTTNNNCCCN AANNGNNNNN GGGGNNNNNA ANNGNGGGGN 
NAAAAAANNG GCCNCCNTTN NNACCGGGGG GNANAANNAA NNNNNGNCNG 
AAGGNNGGGG N

3 prime edge [+] show sequence

Chromosome: 2; Position: 19607659 [Map]; Strand: c
- AT2G47890.1 - [+] show detail - B-box type zinc finger protein with CCT domain
  Distance: -337; Region: promoter
- AT2G47890.2 - [+] show detail - B-box type zinc finger protein with CCT domain
  Distance: -337; Region: promoter

CGTNACNCGA CAATANTCGG TTTTGTACNG AGAANAGGAA NATTAAAGGC 
ACACAAATCT NNCCCACTGT TGNGGTCNTN TACAGANCCT CCTTCTTACT 
ANCNCTCCTG CTCGANCNGG TTCNTNTNAT GGACTAAGCA CCTNNTTGAG 
ANNNACAGGN NAGATGCTNA NCTGNGANNC NNANACACNN TTTTATNTTG 
NNCCCATGNN AAAACNNNAC NGTNTTNNCG TTTNTNGCTT GAACAGCATC 
TCNGTGCATA GACGGANCTG TCGGTGCGNG AACATCATTA TNTACCANCC 
TGGGCCAGTC CACCACTCTT GCCCCGTATA GGAAAAATCA ATATATAAAA 
ATGGAGAGCT ATTTTTCACG AGTTAAGTGA GAGAGATGAG TAAAGAAAGG 
CACGGGAAGG TGAAGAGAGT GTAGGTTTCC AGCTTCTTCC CCAAGAAATA 
AAATGTATTT GACTTTGTCT AAGCAAATAT GTCGTCACTT TAACGTCATT 
CATTACCTAG AATGCAATTA AGATATGGCT TTTACATAAG CCACCAAATT 
TGGTTTTGTT GCCCCAAAAT ATCCCAAGAA AAGATCAACT TCTTCTTCTT 
ACCAAAACTG TCGGCGTCGT CTCCTCTAAG CTCCTCCCAT GGAAGCAGAA 
GAAGGTCATC AGCGTGACCG CCTCTGCGAC TATTGCGACT CCTCCGTGGC 
TCTTGNCTAC TGCAAAGCTG ACTCCGCCAA GCTCTGCCTC GCCTGCN

AT2G47890.1

Model type: Protein coding
Short Description: B-box type zinc finger protein with CCT domain
Computational Description: B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 3246 Blast hits to 2264 proteins in 130 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3153; Viruses - 0; Other Eukaryotes - 93 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G47890.2

Model type: Protein coding
Short Description: B-box type zinc finger protein with CCT domain
Computational Description: B-box type zinc finger protein with CCT domain; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, inflorescence meristem, root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: B-box type zinc finger protein with CCT domain (TAIR:AT1G28050.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR