1. Home
  2. Mutant Lines
  3. 53-4013-1

53-4013-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23452668 [Map]; Strand: c
      • AT5G57910.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -54; Region: promoter
      • AT5G57920.1 - [+] show detail - early nodulin-like protein 10
        Distance: -931; Region: promoter
    Flanking Genome Sequence: 53-4013-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCA ACAACAACAA CAACAACAGC AACAACATGA 
    TGTGTCCTTC TTTTCTGCTT CTTTGTCCTT CTCTGACTTC TCCTCACATT 
    GATATTAGAC TTCTACACGA AACCCAGAAC CTTCCTCTTT CTCATTTCTC 
    TCTTTCCTCT GTTTTCATCT TTTGCTCTTC ATCTCTCTCT TTCTCTCCTT 
    GTGTGATTCT GTAATTTACT CATCTGATGA ATCCAACTCA CGGAGATTTC 
    ACTCCCTTGA ACTCTAATCA TTTCGAGGAT C

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23452674 [Map]; Strand: c
      • AT5G57910.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: -60; Region: promoter
      • AT5G57920.1 - [+] show detail - early nodulin-like protein 10
        Distance: -925; Region: promoter
    Flanking Genome Sequence: 53-4013-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    GACTTGTTGT GAGAAGGAAA GAAAAGAAAA AAGAAAACAA AAATTAAAAT 
    AAAAGGCAAA ATTTGCTTTT TTGGATGTGA GTGTGTTGGG TTGAGACAGC 
    AGTGATGAAG ATGGAAGCAG ACTTATGCAG GAAATGGGTA ATGACTTTGT 
    GGCACTAAGT AAATTGTGTA ATGGGTCAAA GAAAACACAT AAAAGCAACT 
    TCCTTTTTTA ATAACATTTT ATCAACTAGA CAACTTTTTT TATATTAATG 
    GGTTAGTTTG GTTAGAGAAA TCTTGAAGAA ACCAAACCTT TCTGTTTTGT 
    TTCTTGTGTT CCATTGTCGT CTGTAAATAT TAAGTTTATC TTCATTCAAC 
    TGGGTCCATT GTATAGAGAC CGATGAGAAT GGAGGTTGAA ATATATTTTT 
    CAGACTTTTT AATATAATCC CTCAAGAAAA GTCAGATGGT GGAAGAGAAA 
    AAAAAAAAAT TCNCCTTTTA GTTNTTNCTT AAAAAAATNC GGNTTTTGCA 
    AAAAACTNTG TNTTGATTTC TGGAAACNGG NGCAAGGTTT TAGTTTTCTT 
    NTNTAAAAAA AAAANTTTTT TTTTNCCNNN ATTTGTAAAA AAATGGCNTT 
    TTTTTNANAN NCTTNCCNTT TACTTTGTTC CCCCAAAAAA AAANAANNTT 
    NAGGGGANGA CCTTTTNGNN TCACNNNNAA AATTNNNGGG GGTNAAGGCC 
    NNNNTNNNCN GGNCCCNNNN NTGNGCCNNG GG

AT5G57910.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57920.1

Model type
Protein coding
Short Description
early nodulin-like protein 10
Computational Description
early nodulin-like protein 10 (ENODL10); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 15 (TAIR:AT4G31840.1); Has 1297 Blast hits to 1250 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR