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Mutant Lines
53-4014-1

53-4014-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 26031403 [Map]; Strand: c
  - AT5G65160.1 - [+] show detail - tetratricopeptide repeat (TPR)-containing protein
    Distance: 0; Region: exon4 (3UTR)
Flanking Genome Sequence: 53-4014-1 - 5-prime edge
```
CTTGAAAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA NTATATGGAT TGAGAAAAGA AAACAGCCGG AATATTCCTT 
GTTTGATTTT CTTTTTTGGG CTGGCAAAAA TGACAAATCG TGTGAATT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 26031408 [Map]; Strand: c
- AT5G65160.1 - [+] show detail - tetratricopeptide repeat (TPR)-containing protein
  Distance: 0; Region: exon4 (3UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
ATGATATATC CCTCACGGTT GTTTACTGGT TTTTATTCAC TGGAAAAATT 
CTCAAGAGTC TTGTCCACTA CGTTTCATGA GTTGTTGTTG AGCCTCTGAT 
AATCCTCTGA TAACTTGCTC ATCCTCCGGC GACTCCTTTT TCAATATCTC 
GTAGTCACCC ACCGCTAATT CCCACTTTTC GATCTGCATC CGCAATTAAT 
TAATAATTAC AAACAAGTCC CAAATTTTCT CAAAATTTTA TATCGACCCC 
ACTAGTTTTT ATTGTTACCT TGGCGTTACA ATCGGCTCTT CTGAGGCGAG 
CCTTACCATA TCCCGGCCGG ACGGAGAGAG CCGCCGTGCA ATCCTCTATA 
GATTTATCAA ATTGACCCAA TTTTGACCGA CAAGCCGCGC GGTTACAGAG 
CAAAACAGAG TTTCGTGGAT CGTGATCTAA TCCCTCACCA TAAGCGGCGC 
ACGCCTCTTG GAACCGTCCA GATTTAAACA GCTCGTTTCC TTTAAACCGA 
GCTTCAGTCA CCGCTTGTGC CCGTCGTGAA ATCATAATCA CCTCTCGGTT 
ATTCCCGTCC AGCTTCCCGG CGCGTTGGAT CGCCTCCACC GCCTCGTCGA 
ATCTGATAAA ATCAAATTAA ACCGGAATTT TCAAATTAAA AACCAGTTCA 
TAACTCTATA CCGAGTTTCA AACAATAAAA CCAATACAGA CCGAAATTTC 
AGTATAACTC TAGTTTTTAC CATGTTATAT AAACN

AT5G65160.1

Model type: Protein coding
Short Description: tetratricopeptide repeat (TPR)-containing protein
Computational Description: tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide TPR2 (InterPro:IPR013105), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G10090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR