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53-4016-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24207495 [Map]; Strand: w
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: -194; Region: promoter
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: -291; Region: promoter
    Flanking Genome Sequence: 53-4016-1 - 5-prime edge 
    CCTCATTGTC CCTAGGCCTT AACAGATCTA TTTAGTACTA ATACTGTATT 
    TAATAACTTA TCTTGGTAAA GAAATCACAG AAAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24207379 [Map]; Strand: w
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: -310; Region: promoter
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: -407; Region: promoter
    Flanking Genome Sequence: 53-4016-1 - 3-prime edge 
    CAATGAGGTG CATTTTGTTC ATGGAATGAG GATTTAATGG ATGTGTTCAT 
    CTTGGTTAAA TCAATTTGAA GCAGTGTTCT TCGAAACATT TTGTAAACAC 
    ATCTGAAAAT CATCAAATTT AATTGGGGTT TCACGTTTTT ATCCTTGAAC 
    AAACTCAACT AAAGTGATTT AGTAATTCAA ATTTATAGAA TGAATCAAAC 
    GAAATTCGTT TTTGTATCCT ATATAGTATA TCTTATTATT AATCTGCAAA 
    CAAAGATTGG TAAAGAAAAG CGAATCTACA CTATTATATT CACAACTTTG 
    AAGACACATA AAAACCAAAA AACACTTTGA AGTCACATAT TCATAGCTTT 
    GAAGACAAAG CATTTGTTTT CATTTAATGG CGGGTCCTAT ATTTGCAGCT 
    ACGTCCTCCT CACAAACAAA AATCTGTAAA GACTTAAAAG AGTGAGATAG 
    AATAATATGA CTTTTTATTG ATTTATATGG ATAACAAGTA TCCAACCAAC 
    GTAACAAATG TGTCACATGT AAAAAAAAAT GTGTCACATG TTANAAAAAG 
    GTGTAGAAGC TAGCTATAAT CAACAATTAC ATGCATAAAG TAACAAAAGT 
    TATATCATTT TAAGAAGTTG TTATTATTAC AAAAACGAAT GTGTATGGAA 
    AATAGTTAAA GATGATGGGG AAAAAAATCA CTAACATCAG GTTTGATAGC 
    TTTAGTTTTT CTTACTGGAC ATAGTGATGA

AT5G60120.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60120.2

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).
Link
InterPro Scan - TAIR