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53-4026-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24217797 [Map]; Strand: w
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -106; Region: promoter
      • AT5G60150.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -185; Region: promoter
    Flanking Genome Sequence: 53-4026-1 - 5-prime edge 
    CATAACACAG AGACTGTATT GTCTTCTAGG CTTATTGCTA CAAATGGAAA 
    AATAAAACAT GTGCTAACTA CTTTTACTTC AATGCTCCAT GAACCGAACC 
    GATATGATTT TAATCAAACC GAAAAAATAT TATCCTAACC AAACCAAACC 
    AATAAAGGGT GAACGAGAAT TTAAAATTCA AATAAATGGG CNTTTAAAGT 
    CCGGCCCAAT CGATTTGCTT TAAATGACAA TAATAACCTG AGATTATAGA 
    GAACGTTGGT CCGATCTTCT TTCAATTTCA AGTTTTTCAA CCTCTTCCCG 
    CTTACGAGGC CGGGATATTC TATCAACAGT CGTCTCTTCC ATCGGCCGAA 
    CAATTTCCGA TTTACCGACT AGGATTTTCG CCTACAACTT CCGAAGAGAT 
    TTTCTCAGTG TAAGTTTGAA AAAACCTAGC TATAGGATTC CGGATTTCCT 
    AATCGTCAGA TCTTGGGCTC GAAAGAGAAG CTAGAAATGG ATAAGGATCT 
    CTTAGATATC TCTGGAGAAG ACGACGAAGA TAATTGGCTT CTGAAGAATA 
    CGCCGAAGAA AACTAATTCG AGCCGAGGAA AGAGTTATTT GAAATGCTCA 
    CCTCTCCAAA TCCCTAGATC TAGTCGTATC GTTCCTACTC GGCCTCCTTT 
    TTCCCCAATT GGTAAGCGCT TCAATTTCTC GTTCTCGATC CGAGCTTCGT 
    TCTGATAATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24217730 [Map]; Strand: w
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -39; Region: promoter
      • AT5G60150.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -252; Region: promoter
    Flanking Genome Sequence: 53-4026-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTAC 
    TGTTATGCTA CAAAAGGCAA AATCTCTAAA GCAAACCAAA AGATCGGAGA 
    TCTATTAACA AAGCTCTTTT ACTTTTCTAT TTTCAAGAAC CATTTTCACC 
    TTCACTTTCA CTAAAAGAGT TAGGGTTTCA AAGAGGTGAA GATGATGAAC 
    AGAGGTTTCT TCTTTAGACT CTTGTTTTTA TGTTAAGATC TTTATGCTAT 
    TGTTTGTTCT TGATTCTCCA ATCACATAAC CTATCCTATG TTCTGATTTT 
    TTTCTTGCTT TGGAACAGGA ATTTCTGTGG ATGATTGTCT TCCAAAGTTC 
    TTCAAAGTGT ACTTACCTGA TGATTCCGGA GATGATTTGG TAAAAATACA 
    CTTCTCTCTC TGTTTTTGGT TATATGTAGA TTTTTAGTTT ATTGAAACTT 
    TTAGATC

AT5G60142.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60150.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR