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53-4038-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26328038 [Map]; Strand: w
      • AT5G65790.1 - [+] show detail - myb domain protein 68
        Distance: 3460; Region: intergenic
      • AT5G65800.1 - [+] show detail - ACC synthase 5
        Distance: 2708; Region: intergenic
    Flanking Genome Sequence: 53-4038-1 - 5-prime edge 
    ATCTGCTTAT GGGAAAAAGA TAGATACAGG AATATGTCCG CTACTTTATA 
    TTTGTCAACT TTAAAAATAA TATATATATA TATATATATN TATATATCAC 
    GTGATTATTT CCGCAATATC GGGTTNTGAT TATNTAGTTT NTGTTTTTTT 
    TNGGGTCAAN GGTAATTAGA TNCCAACTCT TTNTTTGCTT CAAAAAGACT 
    TGTNNGGCCC AATAAAGCCC ATTTTTGNGG GAAACATATG GCANNGGCAC 
    GTCTAGTANG GCCCCGTAAA ANCCCATTTG TTACGATTTA NAANGGAAAA 
    TTATTAATTC ACCAATCTNG GTTCTNGGCT TTGAATTAGA TAACTAAGCA 
    TTATATGACA CTAATTACTT AGGCTGAANG GCNGGACGAG ACGACTAAAA 
    TTATTATCTT TGAAAAAGGA ACTATNTTTA AAAGTCAAAT AATAATAAAA 
    ATTAAAAAGA GAGATTANTT NGGGTAAACA ATGTTCGAAA AGATGGGAAN 
    AAGAGGATGA ACATTGATAA ACTCCATCGG CATTAATAAA TCGACTTTAT 
    ATTATAATTG AAGACGGNGC ATCTAAGCCA AAGAAACAAA TCTTTGTGGG 
    ATTNGATAAT TGTCTCTNAC GTAACATATG TGCGANGAAT CTTCTTAATC 
    GCGCACATAT TAAGNGGATG TNTGTACNAN ACACATCATT AATTNAAGNT 
    CTATCGNTCN

AT5G65790.1

Model type
Protein coding
Short Description
myb domain protein 68
Curator Summary
Encodes a putative MYB transcription factor.
Computational Description
myb domain protein 68 (MYB68); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 84 (TAIR:AT3G49690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65800.1

Model type
Protein coding
Short Description
ACC synthase 5
Curator Summary
1-aminocyclopropane-1-carboxylate synthase (ACS) is encoded by a multigene family consisting of at least five members whose expression is induced by hormones, developmental signals, and protein synthesis inhibition.
Computational Description
ACC synthase 5 (ACS5); CONTAINS InterPro DOMAIN/s: 1-aminocyclopropane-1-carboxylate synthase (InterPro:IPR001176), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase, class I/classII (InterPro:IPR004839), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421), Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (InterPro:IPR015422); BEST Arabidopsis thaliana protein match is: 1-aminocyclopropane-1-carboxylate synthase 9 (TAIR:AT3G49700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR