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53-4041-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21797044 [Map]; Strand: c
      • AT5G53670.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4041-1 - 5-prime edge 
    ATCGGGATAG AATCGACATT CGAAAGACTA GATGTGTATC CCAATACTGA 
    AAATAAAGAA AAGGATAGCG TCAGATATGT AGTTAAGTAA ACTTTGTATC 
    CAACGCTTAC ATTGAGCATC AAAGGTCATC AAACGTTTTA AATATTGAGA 
    CAAGGAAATA CTAGTACCAT AACAATTTTG AGCAGTCGAC CATAACTCGT 
    AAATCCAAAT TCGAACTTAC CAAAACTAGA ATCTATCAAA ATAACTATAT 
    ATATACTATA ATCTTAGAGC ACACGATAAG GATTTAGGGT TTACATTACA 
    GAACCGAAGT ATTCCATTAC AAGCATTTTC ATATTCATCA CAAATCTAAA 
    GAAGACCATA TCGTAGAGGC ACGATGCCGA GAAAAAATAA TAATATTGAT 
    CTACAATTCT ACATATTTCT GAAAATAGAG AAGAAGATGA AGCATCACGA 
    AATCATCAAA CTCTAATAAT AGCAAGATCG AGAACGTAGC TACTTAACCT 
    GGATTCATGG TTGAGAAGTG TACCACAGCG TTTTATTTTT TACTGAAAGT 
    CTAAATTGGA TACATTTCCC TCATCACTCC ATCATCATAT ATATAAACTA 
    AAACAAGTGA CGCTTCGTAA AAGAAAGAAC AAATATTTAA GATAGACATA 
    TTTTCAAAAT TAGAAAAAAC TAAACGGATT TAAGATTTTC ACCCTTTTTG 
    AAAAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21797118 [Map]; Strand: c
      • AT5G53670.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4041-1 - 3-prime edge 
    GAANACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCGAT 
    GCTAAGCGGA TCAAACTTCT CGGAATGGAA AGAACATTTG TTACTTGTCC 
    TCGCCCTTAT GGATCTTGAT CTTTCCCTCA TGACAGAGCG TCCAAGCTCT 
    CCTAAGGAAC TCAAGCATTG GGACCGCTCT AATCGCGTGA GTATAATGAT 
    AATGAAAATC CGGATTCCAC AAGGATTTAG GGGCGTTGTT CCTGATGATG 
    CTACAACTGC AAAAGACTTC CTTGCCAGTT TGGAGAATTT CTTTGCGAAA 
    AATGAAGAGG CAGAGAGAAG TAGGGTGCAA GCAGAAAGTT CCTCGATGAG 
    TTACATAGAA AATGAGAATG TAAGGGAGCT TATTATGAGG ATGAAAACCC 
    TCGGTGCGAA GCGAAAGAGA CTTGGGATTA ATAATATTTT CTCCAATGAC 
    ATGATGTTAG CGCATTGTGC AGTCAAAATG CTGCCATTGC AGTATATTAG 
    CCTTAAAAAC GTTTACAGTT GTCTCGAAGG GAAATTTGTT AATGAAAACG 
    GTAGATGGCA CACTGGGGAG ATATGGTCTA CTAAAGAGCT CATTAGTCGT 
    TGTGACATGG AAGAAGAGAC TTTAAGGACG GAAATTGCAG ATGAAGCAAG 
    AAAAAGGGAA CAATGAGAGT GTTTGGTTCA GGAGTAGCAA CAAAAGCAAT 
    ATATGCTTAG GAATTGGTAT TGAAATGGTT TGAAGATAAG AAACAAAGAN 
    GCCTTTCGGA GATTTCTATG AAAT

AT5G53670.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR