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53-4044-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23824111 [Map]; Strand: w
      • AT5G59010.1 - [+] show detail - Protein kinase protein with tetratricopeptide repeat domain
        Distance: -846; Region: promoter
      • AT5G59010.2 - [+] show detail - Protein kinase protein with tetratricopeptide repeat domain
        Distance: -846; Region: promoter
    Flanking Genome Sequence: 53-4044-1 - 5-prime edge 
    CATTTAGTGT TCTCTCCATT TAATCTAATC TAGTTTTTCT TTGTTAAAGC 
    ATATCTAATC TAGTTTTTCT TCACATATTT AACTCATATT GCCAAAAGAT 
    TTTGCCTAAA CTACAGATAT TATTCAACAA AGCGATAACN TTTGATTTGA 
    TAAAAGACTG TTATACAGTT TCACTTTTTT ATGTACTTTA TATTATATGA 
    GCATTTGAAG TTTTGAACCC ATAAGCGAAG AACTTTCCAG CTAAAATGAC 
    GCAGACCGGT GACCCAATAT AGCGAAAGAG GTCCATGAAG CATTTTATAT 
    GCGAGTCAAA AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23823997 [Map]; Strand: w
      • AT5G59010.1 - [+] show detail - Protein kinase protein with tetratricopeptide repeat domain
        Distance: -732; Region: promoter
      • AT5G59010.2 - [+] show detail - Protein kinase protein with tetratricopeptide repeat domain
        Distance: -732; Region: promoter
    Flanking Genome Sequence: 53-4044-1 - 3-prime edge 
    AATCTAAATG CAACTTCTCC TAAACTATTA CTACCACTGC CACTTTGTTT 
    TTAATATTCA CACCCACACG CATGCACACA TAGCTTTGAC CCTTTGACCA 
    CTCAGTTTAC GATTTTACCC CTAATGTAGT AATTTCGCAT TATTATTTTA 
    TTTTTACCTT TCATATCTTA ACCGGATGTT TCAGAGTTAG TCAAGGTTGT 
    CTATTTGGTG TTATTTTAAA GTTACTCTAA AACACTATTT TTCTGTTATC 
    TTTCAAAAAG ACCAATTAAA AAATAAAAAT TATAAACATT CCTACACCAT 
    TCTAAAACAT TCTTAAAATT TTCATACAAC TGATTTTGCA AGCT

AT5G59010.1

Model type
Protein coding
Short Description
Protein kinase protein with tetratricopeptide repeat domain
Computational Description
Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59010.2

Model type
Protein coding
Short Description
Protein kinase protein with tetratricopeptide repeat domain
Computational Description
Protein kinase protein with tetratricopeptide repeat domain; FUNCTIONS IN: binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Tetratricopeptide-like helical (InterPro:IPR011990), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with tetratricopeptide repeat domain (TAIR:AT3G54030.1); Has 21140 Blast hits to 20932 proteins in 637 species: Archae - 6; Bacteria - 562; Metazoa - 1681; Fungi - 205; Plants - 18085; Viruses - 31; Other Eukaryotes - 570 (source: NCBI BLink).
Link
InterPro Scan - TAIR