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53-4062-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10829952 [Map]; Strand: c
      • AT2G25450.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 53-4062-1 - 5-prime edge 
    GGGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCAACATC AAACAATATT ATAGCAAAGA TAATGTGATT 
    ATTTAGTTAT TGAAATTGAA ATTATCCACA CACCAATTCA TTTTGTTTTG 
    TTATATATAT CGAGAGGCCT AAGACAACAC TTTGGCGTCT ATCTTTCTTT 
    CCTTTGTATA CCAAATGTTT GATTTTGTTA TTTAAATCAA TGCATTTGTG 
    TAATATCTTA CTTCAATAAA GGTTTGTTAT TATTATTATA TATAAATGTA 
    TTCCAAAATT GTTAATATAG ATTTATGCAT TTTAAGATGC TGCAATAATA 
    ATACAGCATA TATATATTAG TATGTTTTCT GGAATTGTTA TTGAGTGGAT 
    CAATCTAATC TTTTATTACT AAACCCAAAA TTAACCACAC TCACCTCTTC 
    CCTGCCTCTG CTATGTTTTT CGTTAGAAAA AACAAAAATG TATATGAATA 
    TAAGTACATA GAATTTCACC ATTCTTACTT TATAGATAAA TAAGTAAAAT 
    ACAAGCAAAT GCTTCAATAC AAACTATTTG ACAAACATGA AATATTCAAA 
    CTCAAAACCA AAAACATCCT ACTAGTTTCT GCGCTTATTC GGACCAATTA 
    TCTTGGTTAG CCACTCCGGC TTGTATGAAG CAATGACATA TGCAATTGCG 
    AATCCAACCA ACAATCCAGG TCCATACCCC ATTGCCACCG CTTTCCAGTG 
    TAACACTTGT TCTTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10829970 [Map]; Strand: c
      • AT2G25450.1 - [+] show detail - 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 53-4062-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCTT 
    ATAAGAAAGA ATATAAACCT CATATTAAAG GTAAATTGAG ATTATAACAA 
    ATGGAAAATC CTTAAATACA ATCTCGATGT TTATTTAAGA TTTTACATAA 
    TTAAAGGTTC ACACTCTTTT TTTTTTATTT NATTTNATTT TTAGGTNCAC 
    TCTCCTTGAT NGATCCATAC TCTNTNTGGT TNGGGTCAAA CATGCANCCG 
    AAACTCACAA CGGAANAATT ATTGAATGAT NCNTTCAAGG NCTTGAACAT 
    GGTNCGTCNC AGCGNGCCCC AAATTTTNTN GGAAACTCAA NAAAACCTNT 
    GANATNTAGG TTCAAGTTTC AAATCCTTAA ANGGNCCANC NAAAAATT

AT2G25450.1

Model type
Protein coding
Short Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator Summary
encodes a protein whose sequence is similar to ACC oxidase
Computational Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT2G30830.1); Has 7865 Blast hits to 7837 proteins in 966 species: Archae - 0; Bacteria - 1060; Metazoa - 82; Fungi - 676; Plants - 4824; Viruses - 0; Other Eukaryotes - 1223 (source: NCBI BLink).
Link
InterPro Scan - TAIR