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53-4069-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14011295 [Map]; Strand: c
      • AT2G33010.1 - [+] show detail - Ubiquitin-associated (UBA) protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4069-1 - 5-prime edge 
    CCTCATAGTA TTGGGCCCCG GCTCTCTCCA CGTCCCAATT GAAGCGCTCG 
    AGATAAGAGA GGACTTCTTG TGAAGGCAAA TCAGAAGCCA CTGCTAGGAA 
    TAGATTGATT CGTTCTTGCT TCAATTCATG CGATAGTTCC TGCGGCGGAT 
    TCAAAACCCG TCCTGAATGG CTTCTTTTTC TTGGCGGCAA CGGATTCGAA 
    GTCAGACTTG GATAATTGAT CGATCTTGGA TC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14011366 [Map]; Strand: c
      • AT2G33010.1 - [+] show detail - Ubiquitin-associated (UBA) protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-4069-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATAGT 
    AGGATCGAGA TCAGCAGCGT ACTTCATATG ATCGTACGGA GATTGATCAG 
    TCGTATTTGC AGCGGTTTCA AGAGGGTTAT ACGCCGATGA TTGGGGTTTC 
    GAATTTGGAA GGATTCTCAC AAAATGAAAC ATCGACTATG GATTTGATGC 
    AGCATAGTGC TCCGCCTCTT CCATCGTTAC ATTTACCTTC AGAATCTCAG 
    TTTCATGATT CTGTTGGTTA TCAATTAGGG GACCACTCTT CTTCTTTTTC 
    TGGGTAATTT CCTTTTACTT TTCTTGCGAT TTTGTCTATC GAATT

AT2G33010.1

Model type
Protein coding
Short Description
Ubiquitin-associated (UBA) protein
Computational Description
Ubiquitin-associated (UBA) protein; CONTAINS InterPro DOMAIN/s: UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein-related (TAIR:AT2G33000.1); Has 31 Blast hits to 21 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 1; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR