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Mutant Lines
53-4083-1

53-4083-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 8669684 [Map]; Strand: c
- AT2G20080.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: -4658; Region: intergenic
- AT2G20100.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -8366; Region: intergenic

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCTGC TTTGGCTCAA TTGCTCTCTC TTTCAATTTA 
TATCTTGTTA TCAGAAGATA TTGAAATTGA TTATTAATAA GTATATGTTG 
TTATCTCATT CAATTTTATA TTAGACAGTT TCGAATTTAA TATTATGTTT 
TTAGAAACNT GATTAAAGAT TTTTATATAT GCCCAAAAGA TTATTAAACT 
CTAGTTTCAT AACTAAATTC TTAGTTTAAA ATTTGATTTC TTAATAAGGG 
TTTGTATGTA ACAATCTAGT TATATGGATT ACNGTGCAAA TAAAGAGATA 
TGTACTATCT GTTTGTTTTG CAAAGTAAGC GTTCATTTTT TTTATTGCTT 
ATTGATACAA TGCTAGATTA GATTTAATTT TAAACAGCTA AATATTGCGT 
ATAAGTACAT GTTTTAATAA ACTAATATAC AGAAAGGAAT TTATAGGTCT 
GATTGGCTGT CGAGGTAAGT AGCAGGATCA AAGGGATTTG ATTCGAAAAA 
ATATATATTT TTAATAAAAT CCTTANCAAA TCAATAATTT GAGTATTATT 
ANCCCATATN CGAGTANNGA TAGACANGAT ATAGACAGAG NGTGATATAA 
TGTANCAGGG GAANGCNNGG GCNCCCNTCT NCAGGAGAGN TNATNCATNN 
NCACANNCNN CNCATTAATT TTTAATAAAN ACTCTNTCCA TNTGCTNTGN 
NTTNNAAGAA ATNGGGCCCN CTTACTCNCN CNTNAATNNC NT

3 prime edge [+] show sequence

Chromosome: 2; Position: 8669853 [Map]; Strand: c
- AT2G20080.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: -4827; Region: intergenic
- AT2G20100.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: -8197; Region: intergenic

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATGNT 
TNAAACTATG GAAATGGTCA TCACTGAATN CACGGNAAAN TATCATCACT 
TTATTTGTTT NAAAGNTTGT ATNTGAATGT TTCTTATGTA TCATGTAAAA 
CTTNGATTAT ATAATACTGA NCGATTNGCC GNNAANAAAA ACAAAACAAG 
ATATAAANAT GACTCTGACA GAGTTTTCTT TTATCTTAAT TNGAATTGAT 
GTTATTAGTT CACTTAATTN TTTTATGTTT AATTCAACGA GGTATTTGNG 
TAACAAAACC CCCAACACTT CATACTACAA GTCTACAACA AATATATACC 
GTAAAATTTA ANATATGCTC TGCNGAAGAA AGTGGNACCA TAAAATAAGT 
AACTCATGCA ATATNATAGA TC

AT2G20080.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28840.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G20100.2

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT4G29100.1); Has 824 Blast hits to 818 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 6; Plants - 666; Viruses - 2; Other Eukaryotes - 130 (source: NCBI BLink).
Link: InterPro Scan - TAIR